Shewanella mesophila: K0I73_07020
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Entry
K0I73_07020 CDS
T09171
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_07020
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0I73_07020
Archaeal homologous recombinant proteins
K0I73_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
DUF4164
IFT57
DASH_Dad3
nSTAND3
DUF3209
AAA_21
GTP_EFTU
SoxA-TsdA_cyt-c
Hemagglutinin
Motif
Other DBs
NCBI-ProteinID:
QYJ87448
LinkDB
All DBs
Position
1598511..1601567
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLNLTMTAFGPFASEQIIDFNTLGKNPLFLINGPTGAGKTTILDAICFALYGKTTGDE
REGSQMRCDMADDELLTEVSFTFELGQHQYHIRRVPEQPRAKKSGDGYTLQKPEAQLICF
HSDGSEVLLVAAKVSEATAQIEQLTGLDVDQFRQVMVLPQGKFRELLMADSKAREKIFSQ
LFQTHIYRKIEDKLKQQALGIKKEVEAMRNRRDGVLQGAELDNDDALSDELKALAPELAS
ATAKKVDTDKQVQQVSQQLEQAKQLTDEFSALAQLKLLARQLDEQKTQIDQQQQQLFAGR
SAKLLQPVYQAAESRQLELTQASEQQQKSQAHQQQSQDSLNRSLAAIEKLPNLEAQQQQT
LATAQQRRTLLPQLKQLEQLKAHVAQSQQQMLNAEQQGKQTKTKLAQLTDEKLAAQARVP
KLKAHSQQLLILQQQISDTKHHLQFFAQWLRGHSEIEQINARLVAAKERGAQLKEQHQAR
QVHSQTLTLRWHQGQAAILAAKLSVGEACPVCGSLEHPQLARSEQILPTDEEREAAQVNE
QSALTELTSARSDYRQLIEKLKDVEQRNHELSEQLPDIDSLTQAGLETALGQLEREFAEA
NKAQQQLADIESHLAAVQQQEQQLNQQLDQEREQYRQLEKQFNESAGQLKQLQAAIPQEL
VDLAALEQEIAKLEQDAAQLKLQISSLREQHTQAEQQLASAAAQLQSANDTWARANEQHQ
LAVSEFERQLQTSKFDSLSAFKVAILTDDSIAALEQEIKQYEQRCITNQANIAQLETKLA
DCTQPDIAAITEAKSQLETVQQNVLNQWQQLSGRMRQLEQTTEQLKSLDAHSKKLEKQYG
VVGTLSDVANGNTGNKISLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTAKVRSVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMVGVISHVTEMKEQIGSRIDIVKSAMGSKVELILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagacccttgaacttaactatgactgcttttggtccttttgctagcgagcagatcatc
gattttaatacccttggcaaaaatcccctgtttcttattaacggcccaacaggggcggga
aagaccaccattttggatgccatctgttttgcgctctatggtaaaactaccggtgatgag
cgtgaaggttctcagatgcgctgcgacatggcagatgatgagctattgaccgaggtgagt
tttacatttgagctaggtcagcatcaataccatattcgccgcgtgccagaacaacctaga
gccaaaaagagcggtgatggctacacgctacaaaagccagaagctcagttaatttgcttt
cacagcgatggctccgaagtcttgcttgtcgcggctaaggtatcagaggctacggcgcag
atagagcaattaactgggctagatgtcgatcaatttcgtcaagtcatggtgttgccacag
ggtaagtttcgcgagttattgatggccgattccaaggctcgcgagaaaatttttagtcag
ctatttcaaactcacatctatcgcaaaattgaagacaagttaaaacagcaagccttaggc
attaaaaaagaggttgaggcgatgcgtaatcgccgcgacggtgtcttgcaaggtgcagag
cttgataatgacgacgcgctgagtgatgagcttaaggcgttggctcccgagcttgccagc
gctacggcaaaaaaggttgatactgataaacaagttcagcaagtgagtcagcaattagag
caggcgaagcagttaaccgatgagttttccgcgctagcgcagcttaagttattggctcgg
caactcgatgagcaaaaaacgcagatagatcaacagcagcaacagttattcgcagggcgc
agtgctaagctgctacaacctgtttatcaggctgcagaatctcgtcagcttgaattaacc
caagcctccgagcagcagcaaaagtcgcaagctcatcaacagcagagccaagattcgctt
aatcgaagcctggccgccatagagaagctgcctaatttagaagctcagcagcaacagaca
ttagccactgcccagcagcgtcgaacattattaccgcagctcaaacaacttgagcagctt
aaagcccatgtagctcaaagtcagcagcagatgttgaatgccgagcagcaaggtaagcag
acaaaaacaaaactggcgcagttaaccgatgaaaaactcgctgctcaggctcgagtgcca
aagctaaaagcccatagtcagcaattgctgatcttgcagcaacagataagcgataccaaa
catcatctgcagttcttcgctcagtggctgcgcggccattcagagattgagcaaatcaat
gcacgcttagtcgccgcaaaagagcgtggcgcacaattgaaagagcagcatcaagcgcga
caagttcatagtcaaacgttaacgttgcgctggcatcagggccaagcggccatcttagcg
gcgaagttatctgtcggagaagcctgtcccgtgtgtggcagtcttgagcatccacagctg
gcacgaagtgagcaaatactccccactgatgaggagcgtgaagcagcgcaagtcaatgag
cagagtgcactgaccgaattgaccagcgcacgctccgattaccgtcaattaatcgagaag
ttaaaggatgttgagcaaagaaaccatgagctgagtgaacagttaccagatatagatagc
ctcactcaagctggcttagaaacagcgttagggcagctggagcgagaatttgctgaggcg
aacaaggcgcagcaacagctggctgatattgagagtcaccttgctgcggtgcagcagcaa
gaacagcagcttaatcagcagcttgaccaagagcgggaacaatatcgtcaactggaaaaa
cagtttaatgaaagtgcggggcagcttaagcagttacaagccgcgataccgcaagagctg
gtggatttagccgcgctagagcaagagatcgctaagcttgagcaagatgcagcgcagttg
aagttacaaatttcatctctgcgagagcaacatacacaagccgagcagcaattagccagc
gccgcagcgcaactgcaatcggcgaatgacacatgggcgagagcaaatgagcaacatcag
cttgccgttagtgaatttgagcggcagttgcaaacctctaagtttgattccttgtccgca
tttaaagttgccatactaacagacgatagcattgcggctttagagcaggagatcaagcaa
tatgagcagcgctgtattactaaccaagcgaacattgctcagttagagactaaactagcc
gactgcacacagcccgatatcgcggcaataacagaggctaagtcgcaacttgaaacagtg
cagcaaaatgtgcttaatcagtggcagcaattgagtgggcgtatgcggcaactagaacaa
actactgagcagctcaaaagcctagatgcgcactcgaaaaaacttgaaaagcagtatgga
gtcgttgggacactgtctgatgtcgccaatggcaatactggcaataaaattagcttgcag
cgcttcgtgctgagcgtactgctcgatgacgtgctgctggaagcgagccatagattgcaa
ctgatgagtaaggggcgttatcgcttattgcgtaaagaggatagggctaagggcaacaag
gcctcagggctcgaacttgaagttgaagatgcctataccgcgaaagtgcgctctgtggcg
accttaagtggtggagaaagctttatggcagctttatccatggcgctaggattatcggat
gtggtgcaagcttatgctggtggcattaagctcgacaccctgtttatcgatgaaggtttt
ggtagtctagaccaagattcactcgaacttgcgatccgcacgctaatggatctgcagtcg
gctgggcgcatggttggggttatctcccatgttaccgagatgaaagagcagataggcagc
cgcatcgatattgttaagagtgcgatgggcagtaaagtagagcttattcttccttag
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integrated database retrieval system
