Shewanella mesophila: K0I73_07055
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Entry
K0I73_07055 CDS
T09171
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
smes
Shewanella mesophila
Pathway
smes00230
Purine metabolism
smes00240
Pyrimidine metabolism
smes01100
Metabolic pathways
smes01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K0I73_07055 (nrdD)
00240 Pyrimidine metabolism
K0I73_07055 (nrdD)
Enzymes [BR:
smes01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
K0I73_07055 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QYJ87453
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Position
1608166..1610283
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AA seq
705 aa
AA seq
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MPVVIKRDGYRTPFDETRIRDAVIAAAHSAGIEDVAYATQVATQVAEKMADVAEVDIHDL
QDAVENQLMEGPYKSLARVYIEYRHDRDVHREVSSRLNQDIRGLVEQSNAALLNENANKD
SKVIPTQRDLLAGIVAKHYATRHILPKDVVSAHEAGEIHYHDLDYAPFFPMFNCMLIDLA
GMLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYD
KHYQVALKWGITDAKAFATQQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSW
ESRLIQGSMLKVRMAGLGKNRKTAVFPKLVFAIRDGINHKGGDCNYDIKQMALKCATMRM
YPDILNYEQVEKVTGSFKTPMGCRSFLGTYEEDGELIHEGRNNLGVVSLNLPRVALEADG
DEARFFAILDQRLTTARRALDTRIERLEGVKARVAPILYMEGACGVRLRADDDISEIFKN
GRASISLGYIGLHETVNALYGDETHLFDSEQLRDKALAIIEHLKEATVRWREETGYAFSL
YSTPSENLCSRFCKLDTKVYGVISGVTDRGYYTNSFHLDVEKKVNPYDKLDFEMPYPALT
NGGFICYGEYPNMQHNIEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT
CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNYGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagttattaagcgggatggttaccgcacgccttttgacgaaacaaggattcgg
gatgcggtgatagcggctgctcactcagcaggtattgaagatgttgcctacgcgacccaa
gtcgcgactcaagtagccgaaaagatggccgatgttgcagaggtcgatattcatgatctg
caagatgccgtcgaaaatcaattaatggaagggccctataagtcacttgcacgggtttat
atcgagtatcgccatgatcgcgatgttcatcgtgaagtcagtagccgcctaaatcaagat
attcgtggccttgtagagcagagtaatgccgcattgctaaatgaaaatgccaataaagat
tcaaaggtgatcccaacccaacgggatctgcttgctggtattgtggcaaaacactatgcc
actcgccatatcttgcctaaagatgtggtgtctgcccatgaggcgggtgagatccactat
cacgatctcgattacgcaccatttttccccatgtttaactgcatgctaattgatttggct
ggcatgctgacccatggatttaagatgggtaatgctgaaattgagacccctaaatcgatc
tcaaccgcgacggcggtaaccgcacagatcatcgctcaagtggcgagtcatatctatggt
ggcactacgatcaatcgtatcgatgaggtgctagctccatttgtggcaaaaagttacgac
aaacattatcaagtggcgctcaagtgggggattaccgatgcgaaagcatttgcgacccag
cagacagagaaagagtgtcatgatgcatttcaatcgttagagtatgaagtgaatactttg
cataccgcaaatggacaaacgccgtttgtaacctttggttttggtctaggtacctcatgg
gagtcgcgtcttattcagggctctatgttgaaagtacgtatggcgggtctgggtaaaaac
cgtaagacagcggtattccctaaactggtatttgccattcgcgatggcattaatcataaa
ggtggtgattgtaactacgatattaagcagatggccttgaaatgcgcgaccatgcgtatg
tatccagatatcttaaattatgaacaggttgaaaaggtcactggctcatttaagacgccg
atgggatgtcgcagtttccttggtacctacgaggaagatggtgaattaatccatgaaggc
cgtaacaatttaggtgtggtcagcctcaacttgccgcgagttgcgttggaagccgatggg
gatgaagcgcgtttcttcgctattttggatcagcgtttaaccactgcgcgccgtgcatta
gatacccgtatcgaacgtctcgaaggggttaaggctcgtgttgcgccaatcctttatatg
gaaggtgcctgtggcgtacgtttacgcgccgatgatgatattagcgaaatttttaaaaat
ggccgtgcgtcaatttcgttaggctatattggtttacatgaaacggtgaatgcgctttat
ggcgatgagacacatctatttgatagcgagcagttacgtgataaagctctggccatcatt
gagcacctaaaagaagccacggtgcgctggcgcgaagagacaggttatgcgttcagtttg
tacagtacgccaagcgaaaacctatgtagccgtttttgtaagctagataccaaagtctat
ggggttatctctggtgtgaccgatcgcggttactacaccaatagcttccacctcgatgtg
gagaagaaggttaacccatacgataagctggattttgagatgccatacccagcgctgacc
aatggtgggtttatctgctatggggagtaccccaatatgcagcataatatagaagcactt
gaaaacgtgtgggattatagctacagcagagttccttattatggtactaacacaccgatt
gatgagtgttatgactgtggttttaccggcgagtttagctgtacgagtaaagggtttacg
tgtcctaaatgtggtaaccatgaacccagtcgggtgtcggtgacacgtcgagtttgcggt
tatttaggtagccctgatgcgagaccgtttaattatgggaaacaggaagaagtaaagcgc
cgagtaaagcacttatag
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