Shewanella mesophila: K0I73_07490
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Entry
K0I73_07490 CDS
T09171
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smes
Shewanella mesophila
Pathway
smes03030
DNA replication
smes03430
Mismatch repair
smes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I73_07490
03430 Mismatch repair
K0I73_07490
03440 Homologous recombination
K0I73_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smes03032
]
K0I73_07490
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_07490
Enzymes [BR:
smes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I73_07490
DNA replication proteins [BR:
smes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0I73_07490
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0I73_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QYJ87530
LinkDB
All DBs
Position
1724425..1725105
Genome browser
AA seq
226 aa
AA seq
DB search
MLNHQLLKSRLCWRAFKAQNPTLKRYHQALIETLGKPVCDVSFAAVDLEMTGLNPVFDQI
LSIGIVPIRHNQLILSEADHKLVQIDGSVGQSATIHGILDVHLQQAITVDEMMQWFLTET
MGKVLVAHHAPLDLAFLQTALVQMSHEKVKLMAVDTLALEKKRLLRQHEVLKEGSLRLGA
CRARYGLPVYAAHNALIDALACGELLLAQIAAKGDAKHLKVSELFC
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatcatcaactgctcaagagtcgtttatgttggcgcgcctttaaagcgcaaaat
cccacgcttaaacgctatcatcaagcattgatagagacccttggtaagcctgtctgtgat
gtatcctttgcggctgtagatctcgaaatgacagggcttaacccagtgttcgatcaaatc
ttgagtattggcatagtcccgattcggcataaccaacttattctaagcgaggcggatcat
aagttggtgcagatcgatggcagcgtagggcagagtgcgacgattcatggcatattggat
gtgcatttacagcaagcgatcacagtggatgagatgatgcagtggttcttgaccgagacc
atgggcaaggtgctggtggcccatcatgcgccgttagatttagcctttttgcagactgct
ctggtacaaatgagtcatgagaaggtaaaactcatggccgtcgataccttagcgctggag
aaaaaacgcttactgcgtcaacacgaagtgctcaaagagggaagcttgcgacttggcgcc
tgtcgagcgcgttacggattacctgtctacgccgcccataatgcgctcattgatgcgctt
gcctgtggtgaactactccttgctcagatagcggccaagggggatgcaaaacaccttaag
gtgagtgagttgttttgctga
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