Shewanella mesophila: K0I73_08875
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Entry
K0I73_08875 CDS
T09171
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
smes
Shewanella mesophila
Pathway
smes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0I73_08875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_08875 (uvrB)
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0I73_08875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0I73_08875 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
AAA
CENP-F_N
DUF87
Ish1
Motif
Other DBs
NCBI-ProteinID:
QYJ87768
LinkDB
All DBs
Position
2036448..2038466
Genome browser
AA seq
672 aa
AA seq
DB search
MSDSTFQLVSRYQPAGDQPTAIQKLVDGIESGLACQTLLGVTGSGKTFTVANVIKQLQRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPSTNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDFMGQREILQRLSEL
QYTRNDIELQRGTFRVRGEVIDIFPADSDKDAIRIELFDDEIDRLSLFDPLTGHILQRIA
RTTVYPKTHYVTPREKILAATEDIKQELRDRKKYLLDNNKLIEAQRISERVQYDIEMMTE
LGYCSGIENYSRYLSGRRPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
NLVEYGFRLPSALDNRPLKFEEFESLMPQTVFVSATPAQYEIDKSDGEIAEQVVRPTGLL
DPEIEVRPVSIQVDDLLSEVGKRVAVNERVLVTTLTKRMAEDLSEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLIGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYGDKITKSMAKAIDETDRRREKQRQYNLDNGITPQGLLNKITDVMDI
GGHNEHTAKVLPRYQKVAEAKANYQLGDAASLSHQIDELEKRMHQHARDLEFEQAAALRD
QVLNLREALIKA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgattcgacatttcagctagtttcgcgatatcagcctgcgggagatcaacctacc
gctatccaaaagttggtcgatggcatagagtctggtctcgcttgtcagacattgcttggg
gtaactggatcgggtaagacgtttacggtcgccaatgtaattaaacaattacagcggccg
acgattatcatggcgccaaataagaccttagcggcacagttatatggtgagatgaaagag
ttttttcctcacaatgctgttgagtatttcgtttcctattatgactactaccagcccgaa
gcctatgtcccttcaacgaacacctttattgaaaaggatgcgtcggttaatgcacacata
gagcagatgcgtttatctgcgaccaaagcgcttttagagcgtaaagatgtggtgttgatt
gcttctgtctcggcgatttatggtttaggtgatcctgattcatacctcaagatgttgtta
catcttcgtcagggtgactttatggggcagcgtgaaatattgcagcgcctgagtgagctt
caatatacccgtaatgatatcgaactgcagcgcggtacttttcgggtgcgcggcgaggtg
atcgatattttccctgcagattcagataaagatgcaatacgtatcgagctattcgatgat
gagatcgatcgcttaagtttattcgatccattaaccgggcatattctacagcgtattgct
cgcaccacggtttatcccaagacgcattatgttacgccgcgagagaagatcctggccgca
accgaagatattaaacaggaacttcgggatcggaaaaagtatctgttagataataataag
ctcattgaggctcaacgcatctctgaacgagtgcagtatgatattgagatgatgaccgag
ctaggttattgctccgggatagaaaactattcacgctatctgtcagggagacgaccagga
gaggggccaccgaccttactcgattatctcccggcagacggattacttattatcgatgaa
tcccatgttaccgtgccgcaaattggtgccatgtataaaggtgaccgctctcgtaaaaca
aacttggtcgagtatggttttcgcttaccgtcagcgttggataatcgtccgttgaagttt
gaagagtttgaatccttaatgccgcagacggtattcgtatcggcgacaccggcgcaatat
gagatagataaaagcgatggggaaattgcggaacaagttgtgagacctactgggctgctc
gatcccgaaattgaagtgcgacccgtttctatacaggtagatgacttactgtcagaggtg
ggtaaacgagttgccgttaatgaacgggtgttggtgacgacattaaccaaacgtatggct
gaagatctgtcggaataccttgatgaacatggcgttaaagtgagatatctgcattctgat
attgatacagtagagcgagttgagattattcgtgatcttcgcctaggtgtgtttgatgtc
ttgatcggtattaacttgctcagggaaggcttggatatgcctgaagtctcgttagtgtgt
atcttagatgcagataaagagggattcttgcgttcagagcggtcccttattcaaacgatt
ggccgcgccgcccgtaatgttaatggtaaggtgattctctatggcgataagatcactaag
tccatggctaaggcgatcgatgaaactgatagacgaagggaaaaacagcgtcaatataat
cttgataatggtattacgcctcaaggattgttgaacaaaatcaccgatgttatggatatt
ggcggtcataatgaacatacggcgaaggtgttacctcgttatcaaaaagtcgctgaggct
aaggctaactatcagcttggcgacgccgctagcttgagtcatcagattgatgaattagaa
aaacgtatgcatcaacacgcgagagaccttgagttcgaacaggcggcagcattacgtgat
caggtgctgaatttaagagaggcgttaattaaggcatga
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integrated database retrieval system
