Shewanella mesophila: K0I73_11055
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Entry
K0I73_11055 CDS
T09171
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smes02022
]
K0I73_11055
Two-component system [BR:
smes02022
]
NtrC family
Unclassified
K0I73_11055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
AAA_16
HTH_30
HTH_50
nSTAND3
AAA_2
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
QYJ84800
LinkDB
All DBs
Position
complement(2527040..2528392)
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AA seq
450 aa
AA seq
DB search
MELPKLTILVVEDEPDQRHLIVQMLSAANYQLDSADSVEQAIVKIKDSPPDLVFSDWKLG
QLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKV
AKSMALKQQNRRLTSELSQQQQLVGLVGKSAVMQKVYQRVERVSATDATVLIGGESGTGK
ELAARALYQLSTRSHKPFIAINCGAIPETLAEAELFGAEKGAYTGANSLKIGKLEAADGG
TVFLDEIGELPLLQQTNLLRFLQEGVISRLGQNGELKLDVRVIAATHRDLQLEVAEGRFR
EDLYYRLNVVPIHMPALRDRREDIGRLVEHFLQLHSKQYAMQQPKLTPLAMKQLLDYSWP
GNVRELANRIERFVLLGDEDEMVNELASEVRTISSSNFVLPNEGLEWEIFERDCLQQAMS
RHDGNRTKASKFLGLSYKAFLYRLEKHQLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcctaagttaaccattttagtagtcgaagatgaacccgatcaacgccatctc
atcgtacagatgctcagtgcggcaaattatcaactcgacagcgccgatagtgtggagcag
gcgatcgtaaagattaaggactcaccaccagacttagtattttcagactggaaactcggt
cagctaactggcatggacctgcttaactatgttcgccgagagcatcctgatatggggttt
attatcgccaccgcatacggcacgataacccatgccgttgatgccatgcaggctggcgcg
gacgactatttagctaagccttatcagcgacagagcttactgctggccattgaaaaagtc
gctaagtcgatggcgcttaaacagcaaaatcggcgactcacctctgaactgtctcagcaa
caacagctggtgggcttagtgggtaaatcggccgtgatgcaaaaggtgtatcaaagggtt
gagcgggtgagtgccaccgatgctaccgtgctcattggcggggaaagtggtacaggtaaa
gaactcgctgctcgcgcgctttatcaactatcgacgcgaagtcataaaccctttattgcc
atcaactgcggcgcaattccagagactctggctgaagctgagttgtttggggccgaaaaa
ggggcttataccggcgcgaacagcttaaagattggtaaacttgaagctgccgatggtggc
actgtttttctcgatgagatcggcgagttgcctttattacagcaaacgaatttactgcgt
ttcttgcaagagggcgtcatctctcgacttgggcagaatggtgagttaaaacttgatgtt
agggtgattgctgccactcacagagacttacagcttgaagtcgctgaagggcggttccgt
gaagatctctattatcgtctaaatgtggtgcctattcatatgcctgcattaagagatcgc
cgtgaagatattgggcgtttggtagagcattttttacagctgcatagtaagcaatatgca
atgcagcaacccaaactaacccccttggcaatgaaacaactattggactattcatggccg
ggtaatgttcgagagctcgctaatcgtatcgagcgctttgtgctgttaggtgatgaggat
gagatggtcaatgagctcgccagtgaggtgcggaccattagctcatcgaattttgtttta
cccaatgaaggattagagtgggaaatttttgagcgagattgtttgcagcaggcgatgtcg
agacatgatggcaatcgcactaaggcttcaaagtttttaggcctcagttacaaggcgttt
ttatatcgcttggaaaagcatcaattagtgtag
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