Shewanella mesophila: K0I73_11790
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Entry
K0I73_11790 CDS
T09171
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_11790 (phrB)
Enzymes [BR:
smes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0I73_11790 (phrB)
DNA repair and recombination proteins [BR:
smes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0I73_11790 (phrB)
Prokaryotic type
K0I73_11790 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYJ84933
LinkDB
All DBs
Position
complement(2676922..2678343)
Genome browser
AA seq
473 aa
AA seq
DB search
MSCIYWIRRDVRVHDNPALVEAIAQGVKTAVFISTPSQWQQHDLAPIKADLLRRHLVLLA
KQLDALGIESVHLQATDFIDQQQVLLRFCQEHNINTVFANAEPELDEVERDNHIARRGIE
LKLFQCDTILPPGTVLNQQGTMFKVFTPFKKAWLKRVQEVGIACVPTPAVVIDHNNAERL
EPGQKVGQSNDILFDYPLVDSSVWPQSDRVMELVIPRFWQQKLLDYANTRDIPSIKGTSG
LSPYLAIGAISPRWLAVQLIQAQPEVIYDQAHGAFSWLNELIWRDFYKHLLFHSPNLIKG
ESFQVKYQLAQWRGSDKDFTAWCEGRTGYPIVDAAMKQLLHTGWMHNRLRMIVASFLTKH
LLVDWRKGERFFMQHLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQSQKFDPQGVF
IRKYLPELENVPDKQIHFPHDYFNKHGIETDYCKPIVDHKAARLRALDFYQSY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgagttgtatttattggatccgtcgtgatgtaagagtccatgataatcccgccttggtg
gaggctattgcccaaggcgttaaaaccgctgttttcatctccactccatcgcagtggcaa
caacatgatttagcgcccattaaggcggatttgctcagaagacacttagtattattggcc
aaacaactcgatgccttaggtatcgagtctgttcatctacaggcgacagattttatcgat
cagcagcaggttttgcttcgtttttgtcaagagcacaacatcaataccgtttttgccaat
gcagaacctgagcttgatgaagttgagcgtgacaatcatattgctcgtcgtggcatcgag
ctgaaactatttcagtgcgatacgattctaccgccaggcactgtgcttaatcagcagggg
accatgttcaaggtttttaccccttttaaaaaagcgtggctaaaacgggttcaggaggtt
ggcattgcatgtgttcctacgcctgctgttgtcattgaccacaataatgcagagcgttta
gagccaggtcaaaaggttggccaaagcaatgatatccttttcgattatcccttagtggac
tcatctgtatggcctcaaagtgatcgagtcatggagcttgttatccccagattttggcaa
cagaagttacttgattatgcgaatactcgcgatattccgagtatcaagggcacatcaggt
ttgtctccctatttggcgataggggcgataagtccccgctggcttgccgttcaactgatc
caggctcagcccgaggtgatttatgatcaggcgcacggggcattttcttggctaaatgag
ctgatttggcgagacttttataagcatttgctatttcactcccccaatttaatcaaaggc
gagagctttcaggttaagtatcaattggcgcagtggcggggcagtgataaagactttaca
gcatggtgtgaaggtcgaaccggttatcctatcgtcgatgctgcgatgaaacagctgctg
cacacaggctggatgcacaatcgattacgtatgattgtggccagctttttgactaaacat
ctgcttgttgattggcgcaagggggagcgtttctttatgcagcaccttattgatggtgat
ttcagtgccaataatggtggttggcaatgggctgcgagtacaggatgtgatgcgcaaccc
tattttcgaatatttaatccgataactcagagccaaaaatttgatccacaaggcgttttc
attcgtaagtatttaccagagcttgaaaacgtgcccgataaacagattcattttccccat
gattattttaacaaacatgggattgaaactgattactgtaagccgatagttgaccataag
gctgcacggttgagggcgttagatttttaccaatcttattag
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