Shewanella mesophila: K0I73_12540
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Entry
K0I73_12540 CDS
T09171
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
smes
Shewanella mesophila
Pathway
smes02020
Two-component system
smes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0I73_12540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K0I73_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smes03000
]
K0I73_12540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smes02035
]
K0I73_12540
Transcription factors [BR:
smes03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0I73_12540
Bacterial motility proteins [BR:
smes02035
]
Flagellar system
Flagellar assembly proteins
Others
K0I73_12540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_50
AAA
bpMoxR
AAA_7
AAA_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYJ88062
LinkDB
All DBs
Position
complement(2837444..2838874)
Genome browser
AA seq
476 aa
AA seq
DB search
MQTDQRILLVGNQSERINRLSCVFEFLGEQVELLAVDKLEARVANTRFRALVIAQESQSK
ELLQSIAASLPWQPILLLGQSAGVSASNILGCIEEPLSYPQLTELLHFSQVFVQAKRADV
PTSVNQTKLFRSLVGRSEGIAQVRHLISQVAKSDATVLVLGQSGTGKEVVARNIHYISDR
RDGPFIPVNCGAIPAELLESELFGHEKGSFTGAISARKGRFELAEGGTLFLDEIGDMPLQ
MQVKLLRVLQEKVFERVGGSKAINTDVRVIAATHRELETMIANGEFREDLFYRLNVFPVE
MPALCERKDDIPLLLQELVSRVYNEGRGRVRFTQRAIESLKEHSWSGNVRELSNLVERLT
ILYPGGLVDVNDLPLKYRHIDVPEYQVQLSEEELERDALASIFSDEVTVDIPESRFPSEL
PPEGVNLKDLLAELEIDMIRQALDQQDSVVARAAEMLGIRRTTLVEKMRKYGMSKD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagatcaacgaattctacttgtcggtaatcagtctgagcgaattaatcgctta
tcgtgtgtttttgagtttcttggtgaacaagtcgaactgcttgccgttgataaactagaa
gcacgtgttgctaatacccgttttagggcattagttattgcccaagaatcacaatcaaag
gagttgttgcagtcaatcgcagcatccttgccatggcagcctatattgctcttgggtcag
agtgcaggagtgtcagcatctaatatcttgggctgtatcgaagaacctcttagttatccc
caactgacagagcttttgcattttagtcaggtttttgtgcaagcaaaacgtgctgacgtt
cctacgagtgtaaatcaaaccaagttatttagaagcctcgttggccgcagcgaaggcatc
gcccaagttcgtcatttgatcagccaagttgctaaatcggatgctactgtactcgtgctt
ggtcagtctgggacgggcaaagaggtcgtggcgcgcaatattcattatatttcagatcga
cgagatggacctttcattccggttaactgcggtgccattcctgctgaattgttggagagt
gagctttttggtcatgaaaaaggttctttcactggtgcgattagcgcccgtaaaggtcga
tttgaattagccgaaggtggcactctgtttcttgatgaaattggcgatatgccactgcaa
atgcaagttaagttgctgcgtgtattgcaagaaaaagtgtttgaacgcgttggtggtagc
aaagccatcaacactgatgttcgggtgatcgccgcgactcatagagagctcgaaacgatg
atcgctaatggagagtttagagaagatctcttttatcgtttaaatgtttttccagttgaa
atgcctgcattatgtgaacgtaaagacgatattcctttgctgttacaagaactggttagc
cgggtttacaatgaaggacgaggtcgagtacgttttactcaacgtgcaatagaatcgtta
aaggaacattcttggtctggcaacgtgagagaattatcgaatttggttgagcgtttgacg
attctttatccaggtgggttagtcgatgttaatgatttgccacttaagtatcgacatatt
gacgtgcccgaatatcaagttcagctgagtgaagaagagttggagcgagacgcgttagct
tcaatttttagcgatgaggttactgtcgatattccagaaagtcgattcccaagtgaatta
ccacctgaaggggtcaatcttaaggacctgctagcagaacttgaaatcgatatgataaga
caggcattggatcaacaagatagcgtggttgctcgggcggcagaaatgctcgggatccgc
cgtacgacgctggttgagaaaatgcgtaaatatggtatgagcaaagactga
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