Shewanella mesophila: K0I73_12800
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Entry
K0I73_12800 CDS
T09171
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smes
Shewanella mesophila
Pathway
smes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0I73_12800 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_12800 (xseA)
Enzymes [BR:
smes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K0I73_12800 (xseA)
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0I73_12800 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QYJ85098
LinkDB
All DBs
Position
2896965..2898293
Genome browser
AA seq
442 aa
AA seq
DB search
MNMPKNNVYTVSRLNGEVRQLLEGELGRIWLEAEISNFSAPSSGHWYLTLKDNYAQIRSA
MFKGKNRSVTFRPANGQQVLVKGSISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKL
AAEGLFAADTKRPLPDNIQRIGVITSATGAAIRDVLHVLKRRDPSIEVIIYPAPVQGEHA
DRAICHAIMQANDRNEVDLLLVTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHEVD
TTISDYVADLRAPTPSAAAELLSQDALSKSDKLIMAMIRLKQGWQHYRLKQQQRFSMIEH
RLHRQDPKRQLQQYEQRFDEMQLRLESAINARLARLNMSSQGLAHRLAQQSPTNRLKLEH
NRLSFLSQKLNKAMQTRLSDAKTALTHTAHQLDTVSPLATLSRGYSITLDINGKVVQKVT
DVNAGDRLTTKLIDGEVQSTVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgccgaaaaataatgtttacaccgtgtctcgcctcaatggagaggtcagacaa
cttctcgaaggtgaactggggaggatctggctagaagctgagatctccaacttttcggcg
cccagttctggtcattggtatttaaccctaaaagataattacgcccagatccgctcggcg
atgttcaagggcaaaaatcgcagtgtcacttttagaccagccaatggacaacaggtctta
gttaaaggttccattagcgtttacgagcctagaggcgactatcaactgatcatcgattct
atgctccccgcaggtgatggtttattagcccagcagtatgaagcgctaaaaatgaaactg
gctgccgaaggcctatttgcagcagacactaagcgaccactgcccgataacattcaacgt
atcggagtgatcacctctgcaacgggcgctgcaattagagatgtactgcacgtactcaaa
cgccgcgatccctcgatagaggtgatcatctatccagcgcctgtccaaggcgaacatgct
gaccgcgcgatttgtcacgccattatgcaagctaatgaccgcaatgaagtcgacctatta
ttagtcacccgcggcggcggttcattagaagatctatggtgcttcaacagtgaagcgctt
gcccatacaatctacaacagtgcgcttcctattgtttcagcggtcggtcatgaggtcgac
accaccattagcgactacgttgccgaccttcgcgccccgacgccctcagcagcggctgag
ctactgtcacaagatgccttaagcaaaagcgataagcttattatggcaatgatccgccta
aaacagggctggcaacattaccgtttaaagcagcagcaacgctttagcatgatcgagcat
cgtttacaccggcaagatcccaagcgccagttacaacaatatgaacagcgcttcgatgag
atgcagctcagactcgaatcggcgatcaatgccagactggcaagattgaatatgagcagt
caagggttagcccaccgtttagcccagcaatccccaactaaccgtttaaagctagaacac
aatcgattaagttttttaagtcaaaagctcaacaaggcgatgcaaacacggttatctgat
gccaaaacggcattgacgcacacagcccatcaattggacaccgtcagtccacttgcgacc
cttagccgaggttacagtattaccctagacatcaatggaaaagtggttcagaaggttacc
gatgttaacgcaggcgacagactaaccactaagctcatcgatggtgaagtgcaatcgaca
gtgttatga
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