Shewanella mesophila: K0I73_13980
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Entry
K0I73_13980 CDS
T09171
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
smes
Shewanella mesophila
Pathway
smes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K0I73_13980 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smes03019
]
K0I73_13980 (rnc)
03009 Ribosome biogenesis [BR:
smes03009
]
K0I73_13980 (rnc)
03036 Chromosome and associated proteins [BR:
smes03036
]
K0I73_13980 (rnc)
Enzymes [BR:
smes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K0I73_13980 (rnc)
Messenger RNA biogenesis [BR:
smes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K0I73_13980 (rnc)
Ribosome biogenesis [BR:
smes03009
]
Eukaryotic type
90S particles
RNase
K0I73_13980 (rnc)
Prokaryotic type
rRNA processing factors
K0I73_13980 (rnc)
Chromosome and associated proteins [BR:
smes03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K0I73_13980 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DnaG_cat_HB
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QYJ85303
LinkDB
All DBs
Position
complement(3146559..3147236)
Genome browser
AA seq
225 aa
AA seq
DB search
MEPIKNLPRLCRTLGHEFNKLSLLEQALTHRSAASKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADAVEAI
IGAIYLDADLEACRVLVLNWYKTRLAVIEPINQKDPKTLLQEHLQGFKKPLPVYKVVNIS
GEAHAQTFTVECKIEQLDKAVVGIANSRRKAEQIAAAEVLERIKR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgattaaaaacctgccgcgtttatgccgaacattaggccatgagttcaataag
ctaagtcttttagagcaagcgttgactcacagaagtgctgcaagcaaacacaatgaacgt
cttgaatttttaggtgattctattctgtctattgtgatctcggatgctttgtatcatcag
tttccaaaggcgactgaaggtgacttgagtcgtatgcgagcgacgttagtgtgcggcaaa
atgttagctgaaatagctaaagaatttaagctaggagattaccttaaactcggtcctggc
gagcttaagagtggtggatttcgccgtgaatccattttagctgatgcggtcgaagcgatt
attggtgctatctatctcgatgccgatctcgaagcttgtcgagtattagttttaaattgg
tataagacgcgattggcggtcattgagccgattaatcaaaaagatcccaaaaccctgctg
caggaacacctgcagggctttaaaaaacctctacctgtatacaaggttgtcaatattagc
ggagaggctcacgcgcaaacttttacagttgaatgtaaaattgagcaattagataaagcg
gtagttggtatcgccaactcccgtagaaaagcggagcagattgccgcagcagaagttttg
gagcgtattaaacgatga
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