Shewanella mesophila: K0I73_14030
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Entry
K0I73_14030 CDS
T09171
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smes03000
]
K0I73_14030 (nhaR)
Transcription factors [BR:
smes03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0I73_14030 (nhaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QYJ85311
LinkDB
All DBs
Position
complement(3155434..3156342)
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AA seq
302 aa
AA seq
DB search
MLHLNYNHLYYFWMVHKKGSVAKAAETLCLTPQTVTGQIRVLEQRLKGSLFKRVGRSLEP
TELGELVFRYADKMFSLSYEMLDILNYQKDNNILFEVGIADALSKALASRVLLTVVPSDG
TMQLACYESTHESLMERLRAHKLDMILSDCAGESLKYPEILSKKLGECGVGFFSSELFSL
PFPACLEQGKLLIPGKRTSLGQQLHHWFDENGLDITILGEFDDAAMMKAFGYFKQGIFVA
PSIYKQDILAHGMHLLGETTDIKEVYHVMFAERMIQHPAVKRLLETDFTDLFDGKDLQVQ
LL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcttaattacaatcatctgtattacttttggatggtacataaaaagggctct
gtcgcgaaggctgcagagaccctttgtttgactcctcaaacagtaacgggtcagatccga
gtactggaacagcgtttaaaagggagtctatttaaacgtgttggacgttccttagagccg
accgaattaggcgagttggtgtttcgttacgccgataagatgttcagtcttagctatgag
atgctcgatattctcaattatcaaaaagataataatattcttttcgaagtgggtatcgca
gacgcgctctctaaggcactggcaagccgagtgctacttactgttgtgccgagtgacggc
acaatgcaactcgcctgttatgagtcgacacatgagagtttaatggagcgtttgcgcgcc
cataaactcgatatgatcttatctgattgcgcgggagagtcgttaaagtatcctgagatt
ttgtcaaaaaagttaggtgaatgtggcgttggcttcttctcatcagaactcttcagtctg
ccatttcccgcttgccttgagcaaggcaagctgttgatccctggtaagcgaacttcactt
ggtcaacaattacatcattggtttgatgaaaatggtttggatatcacaatattgggcgaa
tttgatgacgccgcgatgatgaaagcctttggttattttaagcaagggatatttgtggcg
ccgtcgatttataaacaagatattttagcgcatggtatgcatttactcggtgaaaccact
gatattaaagaggtatatcatgtgatgtttgcagagcggatgattcagcatcccgccgtg
aagcgactattggaaacggattttaccgatctttttgacggcaaagatctgcaggttcaa
ttgctataa
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