Shewanella mesophila: K0I73_15055
Help
Entry
K0I73_15055 CDS
T09171
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smes
Shewanella mesophila
Pathway
smes00630
Glyoxylate and dicarboxylate metabolism
smes00680
Methane metabolism
smes01100
Metabolic pathways
smes01120
Microbial metabolism in diverse environments
smes01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0I73_15055 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0I73_15055 (fdhF)
Enzymes [BR:
smes01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0I73_15055 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer4_7
Pyr_redox_3
Fer2_4
NAD_binding_8
DAO
Fer4
NAD_binding_7
FAD_oxidored
Fer4_8
HI0933_like
Fer4_16
Fer4_6
Fer4_9
Fer4_10
Fer4_18
GIDA
Amino_oxidase
FAD_binding_3
Fer4_17
FAD_binding_2
Fer4_21
Lys_Orn_oxgnase
AlaDh_PNT_C
2-Hacid_dh_C
Fer4_2
Thi4
F420_oxidored
Fer4_15
Fer4_22
FMO-like
CxC7
Motif
Other DBs
NCBI-ProteinID:
QYJ85505
LinkDB
All DBs
Position
3382761..3386978
Genome browser
AA seq
1405 aa
AA seq
DB search
MITLTIDGRTVTAKRGENLLQCATNSGIAIPSLCHQGMQTDGKQECGLCYVETTDGSGNM
ATIKACETRITETVSVITHSAALSKIRQASLKHLLSDHFADCEAPCQQACPAGVDVQSYL
FQIAQGNHREAVKIIKETLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAADIDL
QGDSYIPNRSPSTGKKVAIVGSGPAGISAGFYLSNAGHEVTLYEAMPKAGGWLRYGIPEY
RLPKAILDQEIELLCKNGMNIQTDTRLGKDIHLSGLLDAFDAVCLAIGAQKAVPMNYPGV
ELDGCYLGVDYLKDHCTNKHYITGKKVAVIGGGNTAIDCARTALREGAEVTLVYRRTRDE
MPAEDYEIEEAEHEGVRFYFLTNPIENHADSNGRINSVTLEKMALGEADASGRRSPKATG
ETFVEDFDTVIPAVSQTPDMEFLGHPKSLLSTGEVALTRWNTFSGCEHTMSSGIEKLFVL
GDSRTGPATAVAAVADGKKAAEAIEKQLNGQLVCGLTQTSFNSEKRSQAPLNLSHFPQRL
KQQKATMAELSIDERQQNFDEIELGFSDEIAIAEAARCLECGCQANTDCKLRDYASEYRI
DSKTLDSEQHRHFVQDSSTPFINFDPNRCISCGACVAMCHQQAGHNAISFEADSYLAIPQ
GASQSTLRQAPRAGFNVTMADSQCVQCGNCVQVCPTGALTDARDKTQGRKAALKQTSTIC
TYCGIGCGITLHTDPANDKILHVSGNAASPVNEGMLCVKGRFGFDFVNSNERLTTPLLRK
QGRLVEVSWDEAISHIASKLKQIKVQHGSDAIAGLASAKATNEDNYLFQKLFRSVIGTNN
IDHCARLCHASTVTALQDSLGSGAMTNDIPSIKESDLIFILGSDTEAAHPIIASKIKQAV
DQHGARLVVADPKRVSIADKAELYLCHRPGSDVMLLNALMQQIITNNWHDLDYIERRVDG
YSELYKEVMKPDYSLENAALITGVGAEQITLLAKMIGTAQKTAIYYAMGITQHTSGHDNV
TAIANLQLLCGNIGVAGAGINPLRGQSNVQGACDMGALPNYFTGYQKVDDPQVQDRFAKA
WDNQALPSKVGIAATEMMHSLAHGQLKALYVMGENPVLSDPDQAHVLKGLKNAELLIVQD
IFMTETAQLADVVLPAASFAEKQGHFTNSERRVQQLQAAIPSPGMARLDWQIINDIANEL
GADWQYQDERQIWHEINQVTPQYRGINWQSVDASNPDSRRGVQWPCPSEGHPGTPILHTE
EFTRGRAIMKPVGYRLPAEMPCEDYPFILSTGRLLEQFHTGTLTRKTDGLNQLATPRVMI
SAFDADKLQLANGDMLTLSTRRGTIKIAAFVTKRAQAGVLFLPFHFAEAAANKLTNNVLD
PVAKIPEFKICAVKVEKAKPIVKTT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgataacactcaccatcgacggtcgaacggtcacagccaagcggggagagaacctactc
caatgcgccacaaattcaggcatagcgatccccagcctatgtcatcaaggcatgcaaacg
gatggcaaacaagaatgcggtctttgctatgttgagactactgacggctcgggcaatatg
gcgaccattaaagcctgtgaaaccagaataacggaaactgtcagcgtcataacccattca
gccgcgctgagtaagatccgccaagcgtctttaaaacacctgcttagcgatcactttgcc
gattgtgaagctccttgccagcaagcctgtcccgctggtgtcgatgtgcaatcctaccta
tttcaaatagcccagggaaatcaccgagaagcggtaaagatcattaaagagaccctgccc
ctacctttatccataggccgtgtatgtccagctttttgtgaatctgcgtgtcgccgaggc
gaactcgatgagccattagccataaggcaacttaaacgccatgcggcggatatcgatcta
caaggcgacagttatattccgaatagatcgccctctacagggaagaaagtcgccattgtt
ggtagcggccctgcggggataagcgcaggtttttatctatccaatgcaggccatgaagtc
actctatatgaagctatgcccaaagctggcggctggctcagatatggtattcctgagtat
cgcctacctaaggcgatactggatcaagagatagaattactctgcaaaaatgggatgaat
attcaaacggatacccgcttgggtaaggatattcatcttagtggcctactggacgctttc
gatgcagtctgcctagcaattggtgcacagaaagccgtacctatgaactacccaggtgtc
gagctggatggctgctatctaggagtcgactacctaaaagatcattgtactaataagcac
tatattactggcaaaaaggtcgccgtcattggcggtggcaatactgcaatagactgtgcc
cgcactgcactcagagaaggcgcagaggtcacattggtttatcggcgcactcgtgatgag
atgcctgccgaagattatgaaattgaagaggccgaacacgaaggtgtgcgcttctatttc
ctcaccaatccaatcgagaaccatgccgatagcaatggccgcatcaacagtgtcacctta
gagaagatggccctaggtgaagcagatgcctcaggcagacgctcacccaaagccactggc
gaaacctttgttgaggacttcgacacggtgatccctgcggtatcacaaacgcccgatatg
gaatttcttggtcacccaaagagcctgttgtcgaccggtgaagtagcactaacgcgctgg
aacaccttctctggctgcgaacacaccatgtcatctggcattgaaaagctgtttgttcta
ggtgactctcgaactgggcccgccacagcggtagccgccgtcgccgatggaaagaaggcc
gccgaagcgatcgaaaaacaacttaacggccagctcgtctgtggactcacacaaacatca
tttaactcagagaaacgtagccaagcaccattaaatcttagccattttcctcagcgattg
aagcagcaaaaagcgacaatggcagagctttcaatagatgaaagacaacaaaacttcgat
gaaattgaacttgggtttagcgatgaaattgccatagcagaagcggctcgctgcctcgag
tgtggctgccaagctaacaccgattgcaaactcagagattatgccagcgaatatcgaata
gatagtaagactctggacagcgaacagcatagacacttcgttcaagatagcagtacgcct
tttatcaactttgaccccaatcgctgcatcagttgcggcgcctgcgtagccatgtgtcac
caacaggctgggcacaatgcaattagttttgaggccgatagttatctggcaattccacaa
ggggcctcacagagcacacttcgtcaggctcctcgcgcaggatttaacgtcaccatggcg
gacagtcaatgcgtgcagtgcggcaactgtgttcaagtttgtccaactggcgcgctaaca
gatgctcgcgataagactcaaggtcgtaaggcagcgctaaaacaaacatccacaatctgc
acctattgtggaattggttgcggaattaccctacataccgatcccgccaacgacaaaata
ctgcatgtcagtggcaacgcagcatcgcctgttaacgagggaatgctgtgtgtcaaaggg
cgatttggcttcgattttgtgaatagcaatgagcgtctcaccacaccgctactgcgtaaa
caggggcgactggtcgaagtcagctgggatgaagctatctctcatattgcaagcaagctt
aagcagatcaaagttcagcatggtagcgatgctattgctggtttggcctcagccaaggcg
accaatgaagataactatctgtttcaaaaattatttagaagtgttatcggcaccaacaat
atcgatcactgcgcgcgcttatgtcacgcctctacggtaacggctttgcaagactccctt
ggcagcggcgccatgactaacgatattccatcgatcaaagagtctgatctcatctttata
ctaggctcagataccgaggcggctcatcctattatcgcctctaagattaaacaagctgtt
gatcaacatggtgcgaggttagttgtcgctgaccccaaacgagtcagtattgccgataaa
gccgagctttatctttgccaccgtccaggctcagatgtgatgctactgaatgccttgatg
cagcaaattattacaaataattggcacgatcttgattacattgaacgccgtgtcgatggt
tacagcgagctatataaagaggtgatgaagccagattacagtctcgaaaatgcggcattg
atcaccggcgtcggtgcagagcagataaccttgcttgccaagatgatcggcacagcccaa
aagacggcgatctattatgctatggggataacccaacacacgagtggacatgacaatgtt
accgccatcgctaacttacaactgctctgcggtaatatcggggttgcaggtgcagggatt
aatccactgcgcggccagagtaacgtacaaggtgcctgtgatatgggggcactgcctaac
tattttactggttaccagaaagtcgacgatcctcaagtgcaagaccgcttcgctaaagcc
tgggacaaccaagccctgccatcgaaggttggcatcgccgccacagagatgatgcactct
ctggctcatgggcaacttaaagcactctatgtcatgggagagaacccagtactgagcgat
cccgatcaggctcatgtactcaaagggttaaaaaatgctgaattattgatagttcaagat
atcttcatgacagaaacggctcagcttgccgatgtcgtactacctgcggcgagctttgcc
gaaaaacaggggcatttcaccaactccgaacgccgtgttcagcaattgcaagcggcgatt
ccctctcccggtatggcacgcctagactggcagatcattaatgatatcgcgaatgaactc
ggcgctgattggcaatatcaagatgaacgccaaatttggcatgagatcaatcaagtcaca
ccacaataccgcggtattaactggcagagtgtcgatgcatctaaccctgatagccgccga
ggggtccagtggccttgcccaagtgaagggcatcctggtacgccgattctacatactgag
gagtttactcgcggcagagcgataatgaagcctgttggctatcgattgcctgccgaaatg
ccctgtgaagattacccttttattctgtctactgggcggcttctggaacagttccataca
ggaacgctgacccgaaaaacagatggtttaaaccaattagcgacaccaagggtgatgata
tcggccttcgacgccgataaactccagctagccaacggcgatatgttaacgctttcgact
cggcgcgggacgattaagattgccgccttcgtgactaaacgagcccaagctggcgtattg
tttctgccgttccactttgccgaggcggcagccaataagctcaccaataatgtgctcgac
cctgtggccaaaattcctgagtttaagatctgcgcggtgaaagttgaaaaagctaagcct
atagttaaaacaacatag
DBGET
integrated database retrieval system
