Shewanella mesophila: K0I73_15805
Help
Entry
K0I73_15805 CDS
T09171
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smes03016
]
K0I73_15805 (thpR)
Enzymes [BR:
smes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K0I73_15805 (thpR)
Transfer RNA biogenesis [BR:
smes03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K0I73_15805 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
KaiB
Mac
Motif
Other DBs
NCBI-ProteinID:
QYJ85633
LinkDB
All DBs
Position
3566970..3567527
Genome browser
AA seq
185 aa
AA seq
DB search
MIKRLFLGISPSSEQANILAHTQSLISTDGRAIPKDNFHVTLYFLGQVDEQQQTQLIKTL
NQLNAQNKLKPFSVDLEAIEWWQKPKVICLAGIAKDPALIKLHQTCRQLSHELNLHQSER
LFTPHITLFRKAREYSPQQIAPLTITAHELHLYHSVSSESGISYPIIHSWQLTASTHCSK
KNAPN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacgactatttctaggtattagcccatcatcagagcaagccaatatcttagcc
cacactcaatctcttatcagtaccgatggacgagctatccccaaagataattttcatgtc
actctctattttcttggtcaagttgatgagcagcaacaaactcagctgataaagacattg
aatcaacttaatgctcaaaacaaacttaaaccctttagtgtcgatttagaagccatcgag
tggtggcagaaacctaaggtgatctgtctggcggggatagcaaaggatcccgcccttatc
aaactgcatcaaacgtgtcggcagttaagtcatgaattaaatttgcatcaaagcgaacgc
ctgtttacacctcatatcaccttgtttcgtaaagctagggagtactccccacagcaaata
gcgccgctaacaataacggctcatgagttacatctttatcactcagtaagcagcgaaagt
ggcatcagttaccctattattcattcatggcaactcacggcatctactcattgttccaaa
aaaaatgcgcccaattag
DBGET
integrated database retrieval system
