Shewanella mesophila: K0I73_16035
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Entry
K0I73_16035 CDS
T09171
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
smes
Shewanella mesophila
Pathway
smes00250
Alanine, aspartate and glutamate metabolism
smes00280
Valine, leucine and isoleucine degradation
smes00310
Lysine degradation
smes00410
beta-Alanine metabolism
smes00640
Propanoate metabolism
smes00650
Butanoate metabolism
smes01100
Metabolic pathways
smes01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I73_16035 (gabT)
00650 Butanoate metabolism
K0I73_16035 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K0I73_16035 (gabT)
00280 Valine, leucine and isoleucine degradation
K0I73_16035 (gabT)
00310 Lysine degradation
K0I73_16035 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I73_16035 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smes01007
]
K0I73_16035 (gabT)
Enzymes [BR:
smes01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
K0I73_16035 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
K0I73_16035 (gabT)
2.6.1.48 5-aminovalerate transaminase
K0I73_16035 (gabT)
Amino acid related enzymes [BR:
smes01007
]
Aminotransferase (transaminase)
Class III
K0I73_16035 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
CoA_binding_2
DUF1565
Motif
Other DBs
NCBI-ProteinID:
QYJ85673
LinkDB
All DBs
Position
complement(3621599..3622879)
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AA seq
426 aa
AA seq
DB search
MNNAELQARKVKAIARGQGNAYPVYVERAKNAEIWDVEGNRFIDFGTGIAVCNTGHSHPK
IVEAVKAQLDNFSHTCVMVNPYESAVELAEKLTEIAPGDSDKKAIFVTTGAEAVENCVKI
ARAYTGRRGVIAFNGGFHGRTNLTMALTGKISPYKHQFGPFAGDIFHAPYPMALHDVSVK
DSLKAIENLFKVDIAPCDVAAIIVEPVQGEGGFYAAPAEFLQALRKLCDQHGIVLIADEI
QSGFGRTGKMFSFEHADVEPDLITMAKGIAGGFPLAAVVGKSDIMDAPLSGGLGGTYGGS
PVGCVAALAVLEVMAEENLVERAVQIGATFNEHLTGLQQQYPHLIGEVRNQGAMIAMELI
VDGDKEQPNTALTQAIIASAAKHGLVLLACGFYGNVIRFLPALTISDATVHEGLEKFNQL
FASVAK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcagaattacaggctcgtaaagttaaggctattgcaagaggccaaggcaac
gcttacccagtttatgtcgaacgtgctaaaaatgccgaaatttgggatgtggaaggcaat
cgttttatcgatttcggtacgggtattgcggtgtgcaatactggtcatagtcatccaaaa
attgtcgaggcggttaaggctcagctcgataactttagccatacttgcgtgatggtgaat
ccctatgaatcggcagtcgagcttgcagagaagctgactgagatcgccccaggtgacagt
gataagaaagcgatttttgtaacaacgggtgcagaggccgttgaaaactgcgtcaaaata
gcgcgcgcttatactggccgtcgaggcgttatcgcttttaatggcggcttccatgggaga
accaatttgaccatggcgctgacgggaaaaattagcccttacaagcatcagttcggccca
tttgcgggggatatcttccacgcgccttatccaatggcgttgcatgacgtcagtgtaaaa
gattcgctcaaggcgattgaaaacctatttaaggtagatattgcaccttgtgatgtcgct
gccattattgtcgaacccgttcagggggaaggtggattctacgccgcgccagcagagttt
ttacaggcgctacgcaagctatgcgatcagcatgggatcgtgttaattgccgatgagatc
caaagtggttttggccgcacaggtaagatgtttagttttgagcacgcagatgtcgaaccg
gatctgatcaccatggcgaaggggatcgccggtggattcccgctagcggctgtggtgggt
aagagcgacattatggatgcgccactgtctggtggtctaggtggtacctatggcggatcg
cccgtgggctgtgtcgcggcgctagcggtactggaggtgatggccgaggaaaacttagta
gaacgcgcggtgcaaattggtgcgactttcaatgagcatctgactgggttgcagcagcaa
tatcctcatcttattggtgaggtgcgtaatcaaggcgcgatgatcgcgatggagttgatt
gtcgatggcgataaagagcagcctaataccgcgctgactcaggctattattgccagtgcc
gccaaacatggattggttttactcgcctgtggtttttacggcaacgtgatccgcttcctg
ccagctttgaccattagtgatgcaaccgttcatgaaggtttagaaaagtttaaccagcta
tttgcctctgtcgcaaaataa
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