Shewanella mesophila: K0I73_17610
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Entry
K0I73_17610 CDS
T09171
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smes03000
]
K0I73_17610
Transcription factors [BR:
smes03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0I73_17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
HTH_30
PAS_4
HTH_22
AAA_3
AAA_2
Mg_chelatase
HTH_7
nSTAND6
PAS
AAA_7
Phage_CP76
AAA_22
Diguanyl_cycl_sensor
IclR_C
HTH_17
AAA
PAS_8
MCM
Motif
Other DBs
NCBI-ProteinID:
QYJ85958
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Position
complement(4000331..4002106)
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AA seq
591 aa
AA seq
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MTIASPTQGWLSDSWSRSQGAGLRETDRPQEKRLNRDALAERHYAHKQLIELMQQHALPL
FNQLMAHSQSRLILSDPEGYVLHHWGVSKYSDKLANIALDIGVNWHEQYRGTNAIGTALT
AKQVVSVIGEQHYIRQHRFMSCTASPIFAPNGEIIGAIDITSEQQRHTQQTLLLISSLVQ
QVETALLCHLPGSHYRIDLAEQPSLIASGWQGIVVANAEGKILGCNPMAKKLLHSARVGD
DVRQYLGQEWNSGEPISHHQRLHLKTQQLVPTPKTHLVSQQIGVRFRDSILERAWQQANK
VVSRNIPLLIFGETGVGKEQFVNKLHRQSQRANRPLVAVNCAALPAELVESELFGYQAGA
FTGASRNGYEGKIRQADGGFLFLDEIGEMPLATQSRLLRVLQEREVVPVGGNRSYKVDIQ
VVAATHADLQGLVRGGQFREDLYYRLNGLQVSLPPLRKRADIERIIHKLHKRYRIAPQRL
SPELLASLLRHSWPGNLRELDNLMQVACLMADGEEVLCWHHLPDALQQQLGQTKQDEPQS
EACESELALMVNANIVATFHRFNGNVSQCAKHLGISRNTLYRKLKLIGLKP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcttcaccgacacaaggttggctatctgactcttggtctcgtagtcaaggt
gcggggctcagagagacggatcgacctcaagagaaacgcctcaatcgcgatgcacttgcc
gagcgccactatgctcataagcagcttattgagttaatgcagcagcatgccttacctctg
tttaatcagctaatggctcacagccaaagtcggcttatcttgtctgacccagaaggctat
gtgctgcatcattggggtgtaagcaaatactcagataagcttgccaatatcgcactggat
atcggtgttaattggcacgagcagtaccgtggtactaatgctatcggcaccgcattaacc
gccaaacaagtggtgtcagtgattggcgaacaacactatattcgccaacatcgctttatg
agttgtaccgccagtcccatctttgcaccaaacggtgagatcataggggcgatagatatc
accagcgaacagcagcgtcatacccagcaaaccttactcttgatctctagcttagtgcag
caggttgagacggcgctcctatgtcacttacctggtagtcattaccgtatcgatctggcg
gagcagccatcgcttatcgcctctggttggcagggaatcgtggtcgctaatgccgagggt
aagattttaggctgtaatccgatggcgaaaaagttacttcatagcgctagagtcggtgat
gatgttcgtcagtacttggggcaggagtggaacagcggcgaaccgatctctcaccatcaa
cgcttgcatctcaagacccagcaactcgtgcccacgccaaagactcatttagtgagtcag
cagataggtgtgcgttttcgcgattcgattttagagcgggcttggcagcaagcgaacaag
gtggtgagtcgtaatattccgctactgatctttggcgaaacgggtgtaggcaaggagcag
tttgttaacaagcttcaccgccaaagtcagcgtgctaatcggcctttagtggccgttaat
tgtgccgcgctacccgcagagctggtggagtctgaactttttggctatcaagcaggggca
tttactggcgcgagtcgcaatggttatgagggtaagatccgccaagccgatggtggcttt
ctgtttctcgatgagattggtgagatgccgctcgccactcagagtcgtttattgcgggta
ttacaggagcgagaagtggttcccgtaggaggcaatcgtagctataaggtcgatattcaa
gtggtcgcagccacacatgccgatctgcaagggctagtgcgcggggggcagtttagggag
gatctttattacaggctcaatggtttgcaggtgagtctaccgcccttaaggaaacgcgcc
gatattgagcggattatccataaactgcataaacgttatcgtattgccccgcagcgatta
tctcccgagttactcgcgagtttgctacgccatagttggccgggcaatttacgcgagtta
gataacctgatgcaggttgcctgcctgatggctgatggcgaagaggtgctttgctggcat
catcttcccgatgcattgcagcaacaattagggcaaaccaaacaagatgaaccacaatca
gaggcttgcgagagtgaattagccctcatggttaacgctaatattgtggcgacctttcat
cggtttaatggcaatgttagccagtgtgccaagcatctggggattagtcgtaatactctg
tatcgcaaacttaagttgattgggcttaaaccttaa
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