Sulfuracidifex metallicus: RQ359_000012
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Entry
RQ359_000012 CDS
T09529
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
smet
Sulfuracidifex metallicus
Pathway
smet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RQ359_000012 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smet03021
]
RQ359_000012 (rpoA1)
Enzymes [BR:
smet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RQ359_000012 (rpoA1)
Transcription machinery [BR:
smet03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
RQ359_000012 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
WOE50808
LinkDB
All DBs
Position
complement(7164..9812)
Genome browser
AA seq
882 aa
AA seq
DB search
MSENEKVIKRIKFGIISPDEIRKMSVTAIITSEVYDEDGTPIEGSVMDPRLGVIEPGQKC
PTCGNTLGNCPGHFGHIELVRPVIHIGFVKHVYEFLKATCSRCGRLKIPQDDITKYERIY
NAIKNRWPSAAKRLNDHIKKTAMKANQCPHCNTKQIKIKLDKPYNFYEERSEGLQRLTPS
DIRERLEKIPDSDVELMGYDPKTSRPEWMILTVLPVPPVTIRPSIMIESGIRAEDDLTHK
LVDIVRINERLKESIDAGAPQLIVEDLWDLLQYHISTYFDNEIPGLPPSKHRSGRPLRTM
AQRLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGVPEHIAKMLTVPERVTTSNI
ERMRQYVINGPETWPGANYVIRNDGRRIDLRYVKDRKEFASALAPGFIIERHLVDGDVVI
FNRQPSLHRISMMGHKARILPGRTFRLNILVCAPYNADFDGDEMNLHVPQSEEAIAETKE
LMIVHRNILTPRYGGPIMGGGQDYISGAYLLTVKTTLLTKEEVMRILGVVDFHGEIGEPA
ILSPKPLYTGKQLVSLFLPEDFNFHGQSNVSSGSRLCKDEDCPHDSYVVIKKGKLLEGVF
DKKAIGNQQPESILHWLLIEYPEEYGLWIMDNLFKAFLRFIEIQGFTMSLDDVTLPEDAK
REIAEQAEKAKKDVDNLILQYKERKLEPIPGRTPEESLENYILDALDKLRNSAGEIATKH
LDPFNYAYIMARTGARGSVLNITQMAAMLGQQSVRGERLTRGYMNRTLPHFKPFDISPEA
RGFVYSSFRTGLNPVEVFYHAAGGREGLVDTAVRTSQSGYMQRRLINALSDLRAEYDGSV
RSLYGEVIQLAYGEDGVFPMQSAHGKSVDVNRLIERVVGWRK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatgaaaaagtaattaaaagaataaaatttggaataatttcccctgacgaa
ataagaaaaatgtcagtgactgcaataattacttcagaagtgtatgacgaggacggaacc
ccgatagagggaagtgtaatggatcctagacttggtgtaattgaacctggtcagaagtgt
cctacttgcggaaatactttggggaactgccccggtcattttggtcacatagagctagta
cgtccggtaatacacataggattcgttaagcatgtatatgaatttctaaaagccacctgc
agtagatgcggaaggctaaagatacctcaggacgatatcacaaaatatgaacgtatatac
aacgcaattaaaaatagatggccttctgctgctaagagactcaatgatcatataaagaag
actgctatgaaagccaatcaatgtcctcattgtaatacaaaacaaattaagataaaactg
gataaaccgtataacttttacgaagagagaagcgaaggccttcaaaggctaactccttct
gatataagggagagattagagaagattcctgattctgacgtcgaactcatggggtatgat
ccaaaaactagtagaccagagtggatgatacttaccgtacttccagtacctcctgttacg
attagaccttccataatgattgaaagtggtatacgcgctgaggacgatctaactcacaaa
cttgttgatattgtaaggattaatgaaaggttaaaggagagcattgatgctggagcacct
caactgatagtggaggatctatgggacttgttacaatatcatatttccacttattttgat
aacgaaattcctggtttacctccgtctaaacatagatctggaagaccattgagaactatg
gctcagaggcttaagggtaaagaaggcagattcagaggcaatctatcaggaaagagggtt
gacttttcatctagaactgtaatctctcctgatccgaacataagtattgacgaggtaggt
gtaccagaacatattgcaaaaatgctcactgtaccagaaagagttacaacttcaaacata
gaaagaatgagacaatatgtaataaatggcccagagacatggccaggcgcgaactatgta
ataaggaatgatggaaggaggatagatctaagatatgtgaaagacaggaaagagttcgcc
tctgccttagcaccgggatttataatagagagacatttagttgacggagatgttgtcatt
ttcaataggcagccctcacttcataggatatcaatgatgggacataaagccagaatatta
ccagggagaacatttaggctcaatatattggtctgtgcaccatacaacgcagactttgat
ggcgacgaaatgaacttacacgtccctcagtctgaagaggccatagcggagacaaaggag
ctaatgatagttcataggaatatattgacgcctagatacggaggtcctataatgggaggt
ggtcaagattacataagcggagcgtatcttttgaccgttaagaccaccttactcaccaaa
gaggaggtcatgaggatattaggagtggtagattttcatggagagataggggagcctgct
attttgtctcctaagccattatatactggtaaacagctagtaagcctcttccttccagag
gacttcaacttccatggtcagtctaatgtatcaagcggctctaggctatgtaaggatgag
gactgcccacatgattcttatgtcgttataaagaagggcaaacttttggagggtgtcttc
gacaagaaagccattggaaatcaacagccagagagtatacttcattggctccttatagaa
tatcctgaagaatacggtctatggataatggacaatttgttcaaagcttttctgagattt
attgaaatacaaggatttactatgtctctagatgatgtgaccttaccagaagacgccaaa
agggagatagctgaacaagcagaaaaagctaagaaagatgtagataatttaattttacag
tacaaagaaagaaaattggagccaataccagggagaacgccagaggagagtctggagaac
tatattcttgatgctttggacaagttaaggaattcagcaggtgaaatagcaacaaaacat
ttggatcctttcaattatgcatatataatggctaggacaggagctagaggtagcgttctt
aatattacccaaatggccgcaatgttaggccaacaatctgtaaggggagagagactaaca
agaggatatatgaacagaaccttgcctcactttaagccatttgacatatctcctgaggca
agaggattcgtctactcttcatttagaactggtctgaatcctgttgaagttttctatcat
gcggctggaggtagggaaggtctagtggatacggcggtaaggacgtcgcagagcggatat
atgcagagaaggcttataaacgctctgtctgaccttagagctgaatatgatggtagcgtc
agaagtctttatggagaagttatacagctggcctatggagaagacggcgtctttccaatg
cagagtgcacatgggaagtcagtagatgtaaataggttaatagagagagttgtagggtgg
aggaaatga
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