Sulfuracidifex metallicus: RQ359_000080
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Entry
RQ359_000080 CDS
T09529
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
smet
Sulfuracidifex metallicus
Pathway
smet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RQ359_000080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smet03021
]
RQ359_000080
Transcription machinery [BR:
smet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
RQ359_000080
Prokaryotic type
Archaeal type
TFE
RQ359_000080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_9
RPA_C
TrmB
Mut7-C
HTH_IclR
HTH_20
WHD_MCM8
Zn_ribbon_IS1595
Zn_ribbon_Com
DUF4912
Sigma70_r3
Rrf2
YacG
Rad50_zn_hook
F-93_WHD
DNA_ligase_ZBD
DUF7342
z-alpha
HTH_39
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_3
Cas12f1-like_TNB
Zn_ribbon_LysW
zf-Mss51
MqsR_toxin
Motif
Other DBs
NCBI-ProteinID:
WOE50867
LinkDB
All DBs
Position
67244..67771
Genome browser
AA seq
175 aa
AA seq
DB search
MVSSEELFVSLAESLLGEDVVSVLKLLLDEGVEMTDDEIANKLNMKVNDVRKRLYSLSEQ
GFVVSRRTREKEKGWYIYFWKPNLDHINEILIERKRQILNKLQSRLEYESSNTFYICSRD
MNRYSFEEAFENEFKCPRCGTPLEYYDSEKVKQFLSEKIKTIQNEIEKETKNGTV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggttagcagtgaagaactctttgtaagcttggctgagagcctactaggagaggacgta
gtgtcagttttaaagttattgttagatgaaggggtcgagatgacagatgatgaaatagcg
aataaacttaacatgaaagttaatgatgtaagaaaaaggctatattcactttcagaacag
gggtttgtagtatctagacgaacaagagaaaaagaaaaaggatggtatatttatttctgg
aaaccaaatctagatcatataaatgaaatattgattgaaagaaaaaggcaaatacttaac
aagcttcagagtaggctagagtatgaaagtagcaatacgttttacatttgcagcagagat
atgaatcgatattcttttgaggaagctttcgaaaatgaatttaagtgtcctagatgtggt
accccattagaatattatgattcggagaaggttaaacaatttctttcggaaaaaataaag
accatacaaaacgagatcgaaaaagagaccaagaatgggacggtttaa
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