Sulfuracidifex metallicus: RQ359_000120
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Entry
RQ359_000120 CDS
T09529
Symbol
xpf
Name
(GenBank) 3'-flap repair endonuclease Xpf
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
smet
Sulfuracidifex metallicus
Pathway
smet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RQ359_000120 (xpf)
03460 Fanconi anemia pathway
RQ359_000120 (xpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smet03032
]
RQ359_000120 (xpf)
03400 DNA repair and recombination proteins [BR:
smet03400
]
RQ359_000120 (xpf)
DNA replication proteins [BR:
smet03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
RQ359_000120 (xpf)
DNA repair and recombination proteins [BR:
smet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
RQ359_000120 (xpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_2
HHH_5
IMS_HHH_1
CK_II_beta
NikR_C
H2TH_5
Motif
Other DBs
NCBI-ProteinID:
WOE50898
LinkDB
All DBs
Position
91888..92610
Genome browser
AA seq
240 aa
AA seq
DB search
MLRIYVDERENQSGIPDLLRSYGVAVVLQQLSVGDYILGDGVAVERKSVNDLVNSVFDKR
LFDQISRMSQTYALSFLLIEGDLSRIKQITDRWKAINGAIISLIMDYKINVIYSMSKSDT
VEILIKIAKKSQEQDRPMRAISLHDKRKLSSIEDFQEYIIESFPNIGSNTAKKIMKKFKS
INDFCNASLPELEKALGSKKRAELIFSIIHKNFSISSEGVENSNEKENKHKSLFDFMDSS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaatttatgtcgatgaaagagaaaatcaaagtgggataccggatttattaaga
agttatggagttgccgttgttttacagcagcttagtgtaggcgactatatattgggcgac
ggggtggccgtagaaaggaaatcagttaatgatttagtaaattctgtatttgataaacgt
ttatttgatcagattagcaggatgagtcaaacttatgctctatcttttctccttatcgaa
ggggatttatcaaggataaaacaaataacagatagatggaaagcaataaatggtgcaatt
atctctttaataatggattacaagattaatgttatttactctatgtcaaaaagtgatact
gtagaaatattaataaagatcgctaaaaaaagtcaggaacaggatagacctatgagagct
ataagcctacatgataagaggaaattatctagcatagaggactttcaggaatatataata
gagtcattcccaaatataggtagtaatactgctaaaaaaataatgaaaaaattcaaatct
ataaatgatttttgtaatgcatctttgcctgaactagaaaaagcgttgggtagcaaaaag
cgtgccgaactaattttttctataatacataagaatttctctattagctccgaaggcgtt
gagaatagtaacgaaaaagagaacaaacataagtcgctttttgatttcatggattcaagt
tag
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