Sulfuracidifex metallicus: RQ359_000396
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Entry
RQ359_000396 CDS
T09529
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
smet
Sulfuracidifex metallicus
Pathway
smet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RQ359_000396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smet03021
]
RQ359_000396
Transcription machinery [BR:
smet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
RQ359_000396
Prokaryotic type
Archaeal type
TFB
RQ359_000396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_AsnC-type
Cyclin_C
HTH_24
Sigma70_r4
Sigma70_r4_2
ORC6_2nd
HTH_Tnp_ISL3
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WOE51143
LinkDB
All DBs
Position
335918..336850
Genome browser
AA seq
310 aa
AA seq
DB search
MSQDSEKDSQFSSSPCPQDKIIFDAERGEYICTETGEVIEERAIDQGPEWRAFTPEEKEK
RSRVGGPLNQTIHDRGLSTLIDWKDKDAMGRTLDPRRRLEALRWRKWQIRARIQSSIDRN
LAQAMNELERIGNLLSLPKSVKDEAALIYRKAVEKGLVRGRSIESVVAAAIYAACRRMKI
ARTLDEISQYTKANRKEVARCYRLLLRELDVEVPVSDSKDYVTRIGSLLRLSGAVMKTAA
EILDKAKTVGLTAGKDPAGLAAAAIYIAALQNDDRRTQKEIAQVAGVTEVTVRNRYKELI
NELKIQIPTQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagattcggaaaaggattctcagttcagttcatctccatgtccacaagataaa
ataattttcgacgcggaaaggggagagtatatctgtactgaaaccggagaggtcatagag
gagagagctatagatcaaggtccagagtggagagctttcactcctgaagagaaggagaag
agaagcagggtgggaggtcctctaaatcagactatacatgataggggtctatcaaccctt
atagattggaaggataaggacgcaatgggcaggacacttgatcccaggagaaggttggag
gctctacgttggaggaaatggcagataagagccaggattcaaagctcaatagaccgtaac
ctagctcaggcgatgaatgagctggagcgtataggaaacctactaagcttacctaagtcc
gtaaaggacgaggcagccctaatatacaggaaggcagtggagaaaggtctagtaagagga
aggagcatagagagcgtagtagcagctgcaatatatgcagcatgcaggagaatgaagata
gctagaactttagatgaaatatctcaatacacgaaggcaaacaggaaggaggtggctaga
tgttatagacttttacttagagagctcgacgttgaagttccagtaagtgactctaaggat
tatgtcacaagaataggatcattgcttcgccttagcggagctgtaatgaagactgcagca
gagatattagataaggctaagacagttggccttactgcagggaaggatccggccggtttg
gcagctgcagcaatctacatagcagcgcttcagaacgacgataggagaactcagaaagag
atagcacaagtggctggtgtcactgaggttacagtaaggaacagatataaagagttgata
aatgaactaaaaatacaaatacctacgcaataa
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