Sulfuracidifex metallicus: RQ359_000404
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Entry
RQ359_000404 CDS
T09529
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
smet
Sulfuracidifex metallicus
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smet03016
]
RQ359_000404 (endA)
Enzymes [BR:
smet01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
RQ359_000404 (endA)
Transfer RNA biogenesis [BR:
smet03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
RQ359_000404 (endA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
WOE51149
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Position
341739..342284
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AA seq
181 aa
AA seq
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MQGLLLESRVVILNVEEAKKIYGNGFFGKPIGVSKPKGPNDIDRPLELSLVEALYLMENS
VINVVDKQGNSVSPQFLREYAKERVDKFNILYKIYSDLRKRKFVVRSGIKFGADFAVYTI
GPGIEHAPFVVIALDLKNEISPVELMSFGRVSHSTRKTLVLGLVDLQRDVIKYVMFKWVK
M
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtctgttacttgaaagcagggtcgttatacttaacgttgaggaagcgaagaaa
atttacggtaacggtttcttcggtaaaccgattggtgtatctaaaccgaagggtcctaat
gacattgacaggccactggagttatctttggtagaagcattatacctaatggaaaactca
gttataaatgtagtagacaagcaaggaaactcagtttcacctcagtttttaagggaatac
gcaaaggagagagtagataaattcaatattctttataaaatctactccgatctaaggaag
aggaagttcgttgtaagatcagggattaagttcggagctgacttcgcagtgtacaccata
ggaccaggaatagaacacgctccttttgttgtgattgccttagatctaaagaacgagata
tcaccagttgagcttatgagctttggaagggtatcccatagtactaggaaaaccttagtc
ttgggactggtagacctgcaacgagacgtgataaagtacgtaatgtttaaatgggtaaaa
atgtaa
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