Sulfuracidifex metallicus: RQ359_000757
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Entry
RQ359_000757 CDS
T09529
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
smet
Sulfuracidifex metallicus
Pathway
smet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RQ359_000757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smet03021
]
RQ359_000757
Transcription machinery [BR:
smet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
RQ359_000757
Prokaryotic type
Archaeal type
TFB
RQ359_000757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_Tnp_ISL3
Cyclin_N
Zn_ribbon_3
Ribosomal_S27e
HTH_11
HTH_Mga
ORC6_2nd
DUF2387
Zn_Tnp_IS91
Zn_ribbon_Nudix
HTH_23
Ribosomal_L32p
Sigma70_r4_2
Zn_ribbon_RPB9
GerE
Motif
Other DBs
NCBI-ProteinID:
WOE51465
LinkDB
All DBs
Position
641339..642214
Genome browser
AA seq
291 aa
AA seq
DB search
MKCPECGEDTLINDPTTNQRVCTSCGYVDEEQLIDTGPEWRAYTQRDRLNKERIGAPLSD
SIHDRGLTTRLDVSSKNRYISMKLKRIHEKTRVSNNDKKLVTLLSILNDQSAKMGLPDYV
KNTASTILRKLVATKAANRVDKNTLVAASLYQACKINQIPRHHQEFKDKFSLERNEFWKA
IKKVQSIKQISPDLKSKIKPNEYIPMVNTSLNLPQTVATKASQLVERMYEDGMSSGKGYL
ALSAAAVYLISTLMDKKKTQKEIADALKITEVTIRNRYKDIVGAFDIEVKI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccagaatgcggagaagatactttgataaacgatcctacaactaatcaacga
gtctgtactagctgtggttatgttgatgaagaacaactaattgataccggaccggaatgg
agagcatacacgcaaagagaccgtttaaacaaggaaagaataggagctcctttgtccgac
agtatacatgaccgtgggcttacaactcgtttagacgtatcatcaaaaaatagatacatt
tcaatgaaacttaaaagaatacatgaaaagaccagagtctctaataacgataaaaagtta
gttacgctactgtccatactaaatgatcagagcgccaagatgggacttcctgactacgtt
aaaaatactgcctctactatactgagaaaattggttgctactaaggcagctaacagagta
gacaagaatacgttggttgcagcttcgttatatcaagcatgtaaaataaatcaaatcccc
agacaccatcaagagttcaaagataagttttcacttgaaagaaatgagttctggaaagcg
attaaaaaagttcagtcaataaaacaaatctcgccagatcttaagtctaagattaaacct
aacgagtatattccaatggtaaacacttctcttaaccttccacaaaccgtagccacaaag
gcgtcacagttggtggaaagaatgtacgaggatggaatgagtagtggaaaaggttattta
gctttaagtgctgcagcagtttacctcataagtacattaatggacaagaaaaagactcaa
aaagaaatagcagatgccttaaagataactgaagtaactattaggaacagatataaagat
atcgtaggcgctttcgacattgaagtcaagatataa
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