Sulfuracidifex metallicus: RQ359_000970
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Entry
RQ359_000970 CDS
T09529
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
smet
Sulfuracidifex metallicus
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smet03016
]
RQ359_000970 (thpR)
Enzymes [BR:
smet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RQ359_000970 (thpR)
Transfer RNA biogenesis [BR:
smet03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RQ359_000970 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
WOE51649
LinkDB
All DBs
Position
complement(823680..824243)
Genome browser
AA seq
187 aa
AA seq
DB search
MRLFIAVDVPLSQKIKDLLKEIDKSGADVKTVEPENLHLTLLFIGEKREDDLKTIEEIMN
SLKGQNSFSASARGVGFFPNLDRPRVIWIGIEDHGNLSEIRKQLVNSFKERKITFDDRNE
FSPHLTLGRIRSPRGIENIKRIWEERKYEDFGNFKVDKVMLFKSILTPRGPIYEELHSVG
LKETSLS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagattatttatcgcagtagatgttccactaagtcagaaaattaaagaccttttaaag
gaaatagacaaaagcggagcagacgtgaagacggtggaaccagaaaatttacatttaacc
ctacttttcataggcgaaaagagagaggatgatctgaaaacgatagaggaaataatgaat
agcctgaagggacaaaacagcttctccgcttcggctagaggagtaggtttctttccaaac
ttagatagacctagagtgatctggataggaatagaggatcatggtaatttatcagagatc
aggaagcaattagttaatagtttcaaagaaaggaagattaccttcgatgacaggaacgag
ttctccccacatttaacgctgggtagaataagatctccaaggggaatagaaaacataaag
agaatttgggaagagagaaagtacgaagacttcggtaacttcaaggtagacaaggtgatg
cttttcaagagcatattaactccaaggggacccatttatgaagagttacattctgtcgga
cttaaagagacaagtcttagctag
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