Streptobacillus moniliformis: Smon_0332
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Entry
Smon_0332 CDS
T01125
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
smf
Streptobacillus moniliformis
Pathway
smf03030
DNA replication
smf03430
Mismatch repair
smf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smon_0332
03430 Mismatch repair
Smon_0332
03440 Homologous recombination
Smon_0332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smf03032
]
Smon_0332
03400 DNA repair and recombination proteins [BR:
smf03400
]
Smon_0332
Enzymes [BR:
smf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smon_0332
DNA replication proteins [BR:
smf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Smon_0332
DNA repair and recombination proteins [BR:
smf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Smon_0332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
HHH_6
PHP
Rv2179c-like
RNase_H_2
tRNA_anti-codon
DEDDh_C
Zn_ribbon_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACZ00816
UniProt:
D1AWZ0
LinkDB
All DBs
Position
391969..396366
Genome browser
AA seq
1465 aa
AA seq
DB search
MKKGYTILTVNEDSLGISNIKITEIALLRSKVNEVIINYDILNIENVFDDLLKIRRVLEK
VSDTLYVKFNINTCNKDKFNIDEVINFTIKLIRDTNPYLSSILSNYTYTKLQDNIKLNLE
TIMNIGKNTEKNISKKIEKIINETFSQNLNFEIFFDVNTDQNVVNIQKQEQEEILEYEIP
ISYKPKEVKKPGIVNNKKYSKSKLKLSKFSDIEDLMVGQEIALRGDIFYFDLVATKSGKL
KIVIYITDYENSVACTKFVNDKEEIKFKIGDSVELSGKYEKYFDDYSIIIRDIKVVEGEE
NKREDNASEKRIELAAHTNMSDMLSTIEPKSGKEGSLVNRAREFGHKAVAVTDYGVVHAF
PFVATGIKEDEEFKVIYGMEAYMVDDSAPLIVKAKDVFIEEEEFVVFDIETTGFSPINDK
IIEIGAVKLKNGKVLDRFSEFVNPQTIIPKKIVELTGINDNMVKDSDIIDKVMPRFLEFV
KGTTLVAHNAKFDVGFISKKCEDLNLETDFSYIDTLEWSKILVDDVKRFNLDTLTKRFNI
KLENHHRAVDDANATAELFKKLLSLVSANGVEKLTDVSEKLEKKPKIADTENITILVKNL
AGLKRLYELVSISHLKYYGEKKPRILKTDLEKDRENFLISSSPIYSGRFNKGKLVSLYVR
GISREEIMQQLDFYDYVQVYPRCIYNDAIEMEEISGYEFIEQMNKDFVQMAKEKNKLVVA
TGNVYYLDDRDKKSKAALLLGSDRAFRTYQIDTGNYYRTTEEMLDEFSYLNEEDIKDVVI
YNTHKINDQIEKIKPIPDGDYKPVMEGAEDEVRNMTYNKAYELYGNPLPEAVETRVKREL
DSIIGNGFAVLYLIAQKLVKKSVDNGYLVGSRGSVGSSLVAYFMGITEVNALYPHYRCEE
CKYFEMKDFEGSGVDLEEKNCPKCNSKLIRDGHSIPFEVFMGFKGDKTPDIDLNFSGEYQ
GEIHKYTKELFGDDYVFRAGTISGLAEKNAYTTAKKYFEENIKKDFEKEIYNKYKTSLKK
LDPITRSSEEKKLEERINDYCNKNKAEIYRIATKCTGARKTTGQHPGGMIVVPDYKSIYD
FTPVQYPANDESSGSITTHFDYHVMDQQLVKLDILGHDDPTTLRMLQDLTNVDIYNIPLT
DPKVISIFNSTEALGVSEEQIGSKMGTNGIPEFGTDFVKKMLEDTLPTTFAELVRISGLS
HGTDVWLNNAQEYVREGIATLSEVITVRDDIMNRLIDKGMDKSEAFNIMEFVRKGQPSKN
KEKWEQYKEIMKASNIDEWYIESCEKIKYMFPKGHAVAYVMMAVRIAYFKVFYPLEFYTA
FLNRKYADFSFEKMFGSIDEVKMNLQKLKELETRDLKVLDKKQIILLEILVEMHYRGIEL
LNIDIYKSDSMKFTIEDGKIRLPLIAMDQLGEVVARTIAEEREIKEFTSIEDLTKRCRIP
KTVLETLKCFGCIGEMPESNQLTLF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggatatactatacttacagttaatgaagacagcttgggtattagtaatatt
aaaataacagaaatagcattacttagatcaaaggtaaatgaagtaataataaattatgat
attttaaatatagaaaatgtatttgatgacttgttaaaaataagaagagtattggaaaaa
gtttccgatactctttatgttaaatttaatataaatacatgtaataaagataaatttaac
atagatgaagttattaattttacaattaaacttattagagatactaacccatatttatca
tcaattttatcaaattatacttatactaaactgcaagacaatattaaattaaatttagaa
actataatgaatataggtaaaaatactgaaaaaaatatatctaaaaaaatagaaaaaata
ataaatgaaacattttctcaaaatttaaactttgagatattttttgatgtaaatacagat
caaaatgtagttaatatacaaaaacaagaacaagaagaaatattagaatatgaaatacca
atttcatacaagcctaaagaagtaaaaaaacctggtatagttaataataagaagtatagt
aaatctaaacttaagttaagtaaatttagtgatattgaagatttaatggttggtcaagaa
atagctttaagaggagatatattctattttgatttagtggcaactaaaagtggcaaatta
aaaatagtaatatatataacagattatgaaaattcggtagcttgcactaagtttgtaaat
gataaggaagaaattaaatttaaaattggagatagtgttgaactttcaggtaaatacgaa
aaatattttgatgattattcaataataataagggatataaaggttgttgaaggagaagaa
aataaaagagaagataatgcaagtgaaaaaagaatagagcttgcagctcatactaatatg
agtgatatgttatctactatagaacctaaatcaggaaaagaaggctctttagttaataga
gcaagagaatttggacataaagccgtagctgttacagactatggtgtagtacatgccttc
ccatttgttgctacaggaattaaagaagatgaagaatttaaggtaatatatggaatggaa
gcatatatggtagatgatagtgctcctttaatagttaaggctaaagatgtatttattgaa
gaggaagaatttgtagtatttgatatagaaactacaggattttcacctattaatgataaa
ataatagaaataggtgcagttaagttaaaaaatggtaaggtattagatagattttctgaa
tttgtaaatcctcagactataattcctaaaaagattgtagaacttactggtattaatgat
aatatggttaaagatagtgatattattgataaagtaatgccaagatttttagaatttgtt
aaagggactacattagtagcccataatgcaaaatttgacgtaggctttatttctaaaaaa
tgtgaagacttaaatttagaaacagatttttcatatatagatactttagaatggtctaaa
atattagtagatgatgtaaaaagatttaatttagatacacttactaaaagatttaatatt
aaattagaaaatcaccatagagcagtagatgatgctaatgcaacagcagaattatttaaa
aagttattatcattagtatctgcaaatggtgtagaaaagctaactgatgttagtgagaaa
ttagagaaaaaacctaaaattgctgatacagaaaatattacaatacttgtaaaaaatctt
gcaggattaaaaagattatatgaattagtatctatttcacatctaaaatattatggagag
aaaaaacctagaatacttaaaacagatcttgaaaaagatagagaaaatttcttgatttct
tcaagcccaatatattcaggaagatttaataagggtaaacttgtcagcctatatgttaga
ggtatttcaagagaagaaattatgcaacagttagatttctatgattatgtacaagtatat
ccaagatgtatatataacgatgcgatagaaatggaagaaatttctggttatgaatttata
gaacagatgaataaagattttgttcaaatggctaaagaaaaaaataagttggttgtagct
actggaaatgtatattatttagatgatagggataaaaaatctaaagcagctctactttta
ggttctgatagagcatttagaacatatcaaatagatacaggtaattattatagaactaca
gaggaaatgcttgatgaatttagctatttaaatgaagaagatattaaagatgttgtaata
tacaatacacataaaattaatgatcaaattgaaaaaattaaacctatacctgatggtgac
tataaaccagtaatggaaggtgctgaagatgaagttagaaatatgacatataataaggcg
tatgaactttatggaaatccacttcctgaagcagtagaaacaagggttaaaagagaactt
gattctataataggtaatggatttgctgtgctttatctaattgcacaaaaactagttaaa
aaatcagttgataatggttatttagttggttcaagaggatctgtaggttcatcacttgta
gcatattttatgggaataacagaggttaatgccctatatccacattataggtgtgaagaa
tgtaaatattttgaaatgaaagactttgaaggttcgggagttgatttagaagaaaaaaat
tgccctaaatgtaattctaaattaataagagatgggcattctataccgtttgaagtattt
atgggatttaagggagataaaactcctgatatagatcttaatttttctggagaatatcaa
ggtgaaatacataaatatactaaagaactatttggggatgattatgtatttagagcagga
actatatcaggtcttgctgaaaagaatgcatatactacagcaaagaaatattttgaagaa
aatataaaaaaagattttgaaaaagagatatataataaatataagacatctttaaaaaaa
ttagatcctattactagatctagtgaggaaaagaaattagaagaaagaataaatgattat
tgtaataagaataaagctgaaatatataggatagctactaaatgtacaggagctagaaaa
actactggtcagcatccaggtggaatgatagtagttccagattataaatcaatatatgat
tttactccagttcaatatccagctaatgatgaaagttctggctctataactacacatttt
gattaccatgttatggatcaacaattagttaaacttgatatactagggcatgatgatcct
acaactttaagaatgttacaggatttaactaatgttgatatatataatatacctttaaca
gatcctaaggtaattagtatatttaattcaacagaagctttaggagttagtgaagaacaa
ataggttctaaaatgggaactaatggtatacctgaatttggtacagactttgttaaaaag
atgttagaagatacattgcctacaacttttgcagaacttgtaagaatatcagggctttca
catggaacagatgtttggttaaataatgctcaagaatatgtaagagagggtatagccaca
ttaagtgaagttattacagtaagagatgacattatgaatagattaatagataaaggtatg
gataaatcagaagcatttaatattatggaatttgttcgtaaaggtcaaccatctaaaaac
aaggaaaaatgggaacagtataaggaaattatgaaggcaagtaatatagatgagtggtat
atagaatcatgtgaaaagataaaatatatgttccctaaaggtcatgctgttgcatatgtt
atgatggctgttagaatagcatactttaaagtgttttatccacttgagttttatactgca
tttttaaatagaaaatatgctgatttctcttttgaaaaaatgtttggaagtatagatgaa
gttaaaatgaatttacagaaattaaaagaattagaaacaagagatttaaaggttttagat
aaaaagcaaataatacttttagaaatattagtagagatgcactatagaggtatagaatta
ttaaatatagatatatataaatcagattctatgaaatttactatagaagatggtaagatt
agattgcctttaatagctatggatcaacttggagaagttgtagcaagaacaatagcagaa
gaaagagaaataaaagaatttacctctatagaagatttgactaagagatgtagaatacct
aaaacagttcttgaaactttaaaatgttttggatgtataggtgagatgccagagtcaaat
caattaactcttttttaa
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integrated database retrieval system
