Streptobacillus moniliformis: Smon_0398
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Entry
Smon_0398 CDS
T01125
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smf
Streptobacillus moniliformis
Pathway
smf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smon_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smf03019
]
Smon_0398
03016 Transfer RNA biogenesis [BR:
smf03016
]
Smon_0398
Enzymes [BR:
smf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Smon_0398
Messenger RNA biogenesis [BR:
smf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Smon_0398
Transfer RNA biogenesis [BR:
smf03016
]
Prokaryotic type
tRNA degradation factors
Smon_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
TcaA_3rd_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
ACZ00880
UniProt:
D1AX54
LinkDB
All DBs
Position
470212..472410
Genome browser
AA seq
732 aa
AA seq
DB search
MFDKKTYILDVAGKEVKIETGEIARQAGGSVLVTSGGTTVLVTTTRSKEVKEGQDFFPLT
VDYIEKFYATGKFPGGFIKRESKPSTEEVLISRLIDRPIRPLFPEGFFNAVHVVINVVSF
DGINMPEDIATIGVSFALGLSDIPFSGPVAGVTVGYVNGEYIINPDKEQRANMDIYLSVA
GTKSAITMVEAGASEVSEEEMLNAIMLGHEEIKKICEQQETILNSLNITKMEFKGINYDE
RVTTFLNKYQGELKNAILVPGKLEKYEAIDNLCESLLSTFKLEIAKEILSKEKTEEEKLL
ELIGENKEKSVDELVKEFKKYYHDLEKKIVRELIIFDKYRADGRKIDEIRPLNAQIDVLK
MPHGSALFTRGETQALVTATLGSKEDEQIIDGMEGEYNKKFFLHYNFPPFSVGEAGFMRA
PGRRELGHGNLAERALKAVMPLIDDFPYTVRVVSEITESNGSSSQASICGGSLALMAAGV
PIKGTVAGIAMGLIKEAENFTVLTDIQGLEDHLGDMDFKVAGTKKGITAIQMDIKIEGIN
KEIMEIALTQAHKGRMHIIEVMEATIPESRPNLPENAPKIINLKIDPSKIAGLIGPAGKI
IKSIIEETGVKIDVEDDGRVSIFGVDQEKMNRAFELVTQYTLTVELDKVYKGRVTKLAKF
GAFVELVPGTEGLLHISEISHKRIKQVEDVLKVDDIVDVKVIALEDNNKFSLSMKALIEK
EEAKEENSNEGE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaaaaaaacatacattttagatgtagcaggaaaagaagttaaaattgaaaca
ggtgaaattgcaagacaagcaggaggatctgttttagtaactagtggaggaacaacagta
cttgttacaacaacaagaagtaaagaagttaaagaagggcaagatttctttccattaact
gtagattatatagaaaaattttatgctacaggtaaattcccgggtggatttattaaaaga
gaatctaagccatcaacagaggaagttttaatttcaagattaattgatagaccaataaga
cccttatttccagaaggattttttaatgcagtacatgtagtaattaatgtagttagtttt
gatggtataaatatgccagaagatattgctactataggggtatcatttgcattaggttta
tcagatattccatttagtggaccagttgcaggagttactgtaggatatgtaaatggtgaa
tatattattaatccagataaagaacaaagagctaatatggatatttacttatctgttgca
gggactaaaagtgcaataactatggttgaagctggagcaagtgaagtaagtgaagaagaa
atgttaaatgcaataatgttgggacatgaagaaattaaaaaaatatgtgaacaacaagaa
actattttaaatagtttaaatattacaaaaatggaatttaaaggcataaattatgatgaa
agagtaacaacttttttaaataaatatcaaggtgaattaaaaaatgcaattttagtacct
ggaaaattagaaaaatatgaagctatagataatttatgtgaaagtttactttcaacattt
aaattagaaatagcaaaagaaattttatcaaaagaaaaaactgaagaagagaaattatta
gaattaattggagaaaataaggaaaaatctgttgatgaattagttaaagaatttaaaaaa
tattatcatgatttagaaaagaaaatagtaagagaattaataatatttgataaatataga
gcagatggaagaaaaattgatgaaatcagaccattaaatgcacaaattgatgtacttaaa
atgccacatggttcagccttatttactcgtggagaaactcaagctttagttactgcaact
ttaggttctaaagaagatgaacaaattatagatggtatggaaggtgaatataataagaag
tttttcctgcactataatttcccaccattttcagttggagaagcaggatttatgagagca
cctggtagaagagagttagggcatggtaatttagcagaaagagcacttaaggctgtaatg
ccattaatagatgatttcccatatacagttagagttgtatcagaaataactgaatctaat
ggttcatcatctcaagcctctatatgtggtggttctcttgcattaatggcagcaggagtt
cctataaaaggaactgtagcaggtatagctatgggattaattaaagaagcagagaatttc
acagtacttacagatattcaaggattagaagatcatctaggagatatggactttaaagta
gcaggtactaaaaaaggaattacagctatacaaatggatattaaaatagaaggtattaat
aaagaaataatggaaatagcattaactcaagcacataagggaagaatgcatataatagaa
gttatggaagctactataccagaatcaagaccaaatttacctgaaaatgcacctaagata
attaatctaaaaatagatccaagtaaaatagcaggattaataggaccagcaggtaagata
attaaatctatcattgaagaaacaggagttaaaattgatgttgaagatgatggaagagta
tcaatatttggtgtagatcaagaaaaaatgaatagagcatttgaacttgtaacacaatat
acacttacagttgaattagataaggtatataaaggaagagttactaaacttgcaaaattt
ggtgcttttgttgaacttgtacctggtacagaaggattattacatatatctgaaatatca
cataagagaattaaacaagttgaagatgtcttaaaagttgatgacatagttgatgttaaa
gttatagctttagaagataataataaattcagtttaagtatgaaagcattaatagaaaag
gaagaagctaaagaagaaaattcaaatgaaggagaataa
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