Streptobacillus moniliformis: Smon_0706
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Entry
Smon_0706 CDS
T01125
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smf
Streptobacillus moniliformis
Pathway
smf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smon_0706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smf03019
]
Smon_0706
03009 Ribosome biogenesis [BR:
smf03009
]
Smon_0706
Enzymes [BR:
smf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Smon_0706
Messenger RNA biogenesis [BR:
smf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Smon_0706
Ribosome biogenesis [BR:
smf03009
]
Prokaryotic type
rRNA helicases
Smon_0706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Flavi_DEAD
Hera_DD
Cas3-like_C_2
TPR_20
Motif
Other DBs
NCBI-ProteinID:
ACZ01179
UniProt:
D1AY03
LinkDB
All DBs
Position
797218..798849
Genome browser
AA seq
543 aa
AA seq
DB search
MNFKDYNLSNEMLEALEKKRFVSPSEIQALVIPELLKEETHLIGQAQTGTGKTAAFSIPI
LEKIIPTKKVKALILAPTRELANQVSDEIYSLKGKKEVKILAVYGGASIENQIKNLKKGV
DIVVGTPGRVIDMINKGALKLNELEYFVLDEADEMLNMGFIEDIELILEKTNEDKKMLFF
SATIPKPILAIAKRFMPEHKILKVQKKELTTHLTEQIYFEVRREDKFEALCRVLDYKPDF
YGIVFCRTKSEVDEVTNKLKARNYDAEAIHGDITQGLREKALDLFKNKILNILVATDVAA
RGIDVSNLTHVINYSIPQESDSYVHRIGRTGRAGNKGIAITFVTPQESRKLAQIKRETKS
DIKKENIPNVEDIINAKEELLIASVEEIMLENDYKLYLDLANKLLKGKNTEAAVASLLRH
IYDDEFIPESYSKIKNVQVQIKDNTRLFIALGEKDGLNVNKLLKLIHEKTKVPGRKIKDV
KVMPNFSFITVPLDEAEIIIKIFNKNTTKNSKPMVEVANSDKSGNGSNKKSRTKLGDSKK
KRR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagattacaatttaagtaatgaaatgttagaagcattagaaaaaaagagg
tttgtttcaccaagtgaaatacaagcattagttattcctgaattattgaaagaggaaact
catttaataggtcaggctcaaacaggtacaggtaaaactgcggctttttcaatacctata
ttggaaaaaataattcctacaaaaaaggttaaagcattaatacttgctcctacaagggag
ctggcaaatcaagttagtgatgagatatattctttaaagggtaaaaaagaagttaaaata
ttagctgtatatggtggtgcttcaattgaaaatcaaattaaaaacttaaaaaagggtgtt
gatatagttgtaggaacaccagggcgtgttattgacatgattaacaaaggagcattaaaa
ttaaatgaattagagtattttgtcttagatgaagcagatgaaatgttaaatatgggattt
attgaagatatagaactaatattagagaaaacaaatgaagataaaaaaatgctatttttc
tctgcaactatacctaaaccaatacttgctattgcaaaaagatttatgcctgaacataag
atattaaaggttcagaaaaaagaattaacaacacatttaactgagcaaatatactttgaa
gttagaagagaagataaatttgaagctttatgtagagttttagactataagccagatttt
tatggtatagtattttgtagaactaaatcagaagttgatgaagttacaaataagttaaag
gctagaaactatgatgctgaagcaatacatggggatataactcaaggattaagagaaaaa
gcattagatttatttaaaaataagatattaaatatattagttgcgacagatgttgctgct
cgtggaatagacgtaagtaatttaacacatgttattaattactctataccacaagaatca
gattcttatgttcatagaataggtagaacaggtagagctggaaataaaggtattgctatt
acatttgtaacacctcaagaatcaagaaaattagcacaaataaaaagagaaactaaatct
gatataaagaaagaaaatataccaaatgttgaagacattattaatgcaaaagaagaatta
ttaattgcatctgtagaagaaataatgttagaaaatgattataaactatatttagattta
gctaataaactattaaaaggtaaaaatactgaagcagctgtagcttctttattaagacat
atatatgatgatgaatttattcctgaaagttatagtaaaataaagaatgtacaagttcaa
attaaagataatacaagattatttatagctttaggtgaaaaagatggattaaatgtaaat
aaattattgaaacttatacatgaaaaaacaaaggtaccagggagaaaaattaaagatgta
aaagtaatgcctaatttctcattcattacagtacctttagatgaggctgaaataataatt
aagatatttaacaaaaacactacaaaaaatagcaaacctatggttgaagttgctaattct
gataagtctggaaatggatcaaataaaaaaagtagaacaaagctaggagatagcaagaaa
aaaagaagataa
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