Streptobacillus moniliformis: Smon_0840
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Entry
Smon_0840 CDS
T01125
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smf
Streptobacillus moniliformis
Pathway
smf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smon_0840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smf03019
]
Smon_0840
03110 Chaperones and folding catalysts [BR:
smf03110
]
Smon_0840
03029 Mitochondrial biogenesis [BR:
smf03029
]
Smon_0840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smf04147
]
Smon_0840
Enzymes [BR:
smf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Smon_0840
Messenger RNA biogenesis [BR:
smf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Smon_0840
Chaperones and folding catalysts [BR:
smf03110
]
Heat shock proteins
HSP60 / Chaperonin
Smon_0840
Mitochondrial biogenesis [BR:
smf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Smon_0840
Exosome [BR:
smf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Smon_0840
Exosomal proteins of other body fluids (saliva and urine)
Smon_0840
Exosomal proteins of breast cancer cells
Smon_0840
Exosomal proteins of colorectal cancer cells
Smon_0840
Exosomal proteins of bladder cancer cells
Smon_0840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PDZ_3
Motif
Other DBs
NCBI-ProteinID:
ACZ01308
UniProt:
D1AYD2
LinkDB
All DBs
Position
complement(933608..935209)
Genome browser
AA seq
533 aa
AA seq
DB search
MSKIIKFNEEARLSLQKGVDILADAVKITLGPRGRNVVLDRGYGSPLITNDGVTIAKEIE
LEDYTENLGAELMKEVAIKANDVAGDGTTTATVLAQSLIKEGFKMIQAGANPVFIRRGIE
KTSKLAIEKLKERSVTIKNNNEIEQVASISAADENIGKLIASAMKTVGENGVITVEEAKS
LETSMEVVEGMQFDNGYLSPYMVTDTERMSVELENPYILLTSRKINSMKEILGLLEKVVE
SSKPLLIIADDIEGEALSTLVLNKIRGALNVVVVKAPAFGDRRLAMLEDIAILTGAIVIS
EEKAMKLEEADLDDLGMARRVKVTKDKTIIVDGMGNELERKERIIQIKGQIEESKSEYDK
EKLQERLAKLSGGVAVIRVGAATETEMKEKKMRIEDALNATRAAVEEGVVAGGGTALIQI
FKDIKEFNIEGEEGIGVEIFKKALFAPLRQIAINSGVDAGVVIEKVLNSELNYGYDALKE
EYVNMFERGILDPTKVTRSAIQNSSSIASLLLTTEVSVVTKEENKNQQMPNMY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagataataaaatttaatgaagaagcaagactttctttacaaaaaggtgtagat
attttagctgatgcagttaagattacattaggacctcgtggtagaaatgttgtattagat
agaggttatggatctccattaattactaatgatggtgtaacaatagcaaaagaaatagaa
ttagaagattatactgaaaatttaggggcagaacttatgaaagaagttgccattaaagca
aatgatgttgcaggagatggaacaactactgctacagttcttgctcaaagtttaattaaa
gaaggatttaaaatgatacaagcaggagcaaatcctgtatttataagaagaggtatagaa
aaaacttctaagttagcaatagaaaaattaaaggaaagatcagttacaattaaaaataat
aatgaaatagagcaagtggcatctatttcagctgctgatgaaaatataggaaaattaata
gcaagtgctatgaaaacagtaggagaaaatggagtaataacagtagaagaagcaaaatca
ttagaaacttcaatggaagttgtagaaggtatgcaatttgataatggatatttatcacca
tatatggttacagatacagaaagaatgagtgtagaacttgaaaatccatatatactttta
actagtagaaaaattaattctatgaaagaaattttaggattacttgaaaaggtagtggaa
agttctaaaccattattaataattgcagatgatatagaaggggaagctctttctacatta
gtgttaaataagattagaggggcattaaatgttgtagtagttaaagcaccagcatttgga
gatagaagacttgctatgcttgaagatattgcaatattaacaggagctatagtaatttca
gaagaaaaagcaatgaaattagaagaagcagatttagatgatctgggtatggcaagaagg
gttaaagtaacaaaagataaaacaataattgtagatggaatgggaaatgaattagaaaga
aaagaaagaataattcaaataaagggtcaaatagaagaaagtaaatcagaatatgataaa
gaaaaacttcaagaaagattagctaaattatcaggtggagtagctgtaataagagtagga
gcagcaactgaaacagaaatgaaagaaaagaaaatgagaatagaagatgctctaaatgca
actcgtgcagcagttgaagagggagtagttgcagggggaggaactgctttaattcaaatt
tttaaggatataaaagaatttaacattgaaggggaagaaggtataggtgtagaaatattt
aaaaaagcattatttgcacctttaagacaaatagcaattaattcaggtgtagatgctgga
gttgtgatagaaaaagtacttaattcggaattaaattatggttatgatgcattgaaagaa
gaatatgtaaatatgtttgagcgtggaatattagatcctactaaagttactcgttcagct
atacaaaattctagttcaatagcctcgcttttattaactacagaagttagtgttgttaca
aaagaagaaaataaaaatcaacaaatgccaaatatgtattag
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