Candidatus Karelsulcia muelleri GWSS: SMGWSS_214
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Entry
SMGWSS_214 CDS
T00630
Symbol
pnp
Name
(GenBank) putative polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smg
Candidatus Karelsulcia muelleri GWSS
Pathway
smg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMGWSS_214 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smg03019
]
SMGWSS_214 (pnp)
03016 Transfer RNA biogenesis [BR:
smg03016
]
SMGWSS_214 (pnp)
Enzymes [BR:
smg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SMGWSS_214 (pnp)
Messenger RNA biogenesis [BR:
smg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMGWSS_214 (pnp)
Transfer RNA biogenesis [BR:
smg03016
]
Prokaryotic type
tRNA degradation factors
SMGWSS_214 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
PNPase
RNase_PH_C
KH_PNO1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
ABS30611
UniProt:
A8Z660
LinkDB
All DBs
Position
complement(207843..210029)
Genome browser
AA seq
728 aa
AA seq
DB search
MIPELIKENLFLEDGRALSIETGELARKANGSAVVRMGNTSLLATVVISKESKEDFKFIP
LTIDYREKYSAGGKIPGGYIKREGRPYDEEILTMRLVDRLLRPLFKDNYYNEIQIMISLL
SYDINVLPDGLAGLVASTAVSISEISFQGPVSTVRIIRINDAFIINPGIEEIKKSDFYLD
LDLDLDLIVGGTNNYIILVEGEMREISEIEMMEAIVKAHKYIQLQIEAQISLITKNKKFI
KKKLYKIELYNYYYKYINFNLNVFYIKEKIKFISYEEIDYIYKSCLFKQKRSNKIYNILK
KIKFHFYNESIVINNLEIDIIFDEIKKEIIKNILFKENIRLDGRSLDDIRNICSQVDCLP
GVHGSAIFTRGETQALSTVTLGSSLDVNKIDNAIMRAKQRFYLHYNFPPFSTGEIKLLKG
VSRREIGHGNLAQRALKNIIPTTYTIRVVSDVLESNGSSSMATVCASTLALMDSGIIVKR
PVSGISMGLIMNYLTGEAIILSDLLGDEDYIGDMDFKITGTEYGMTACQMDIKISGITYD
VLSYTIFKAKKGLLFIIKKMLTTLSCPRKSLNITATKIYTFYIPKKLIGAVIGSGGKRIQ
EIQVSTETNIKIKEKNYLGVIEILGKNETKLKIAILKIKNITFVPKVGTIYKAKVKNIKK
FGVFVKISKYLEGLLHIYEISWLTKVESFIRKGDIISVKYLGKNNKFRKIKLSHKMIFSR
YYLNKNLK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagaattaataaaagaaaatctttttttagaagatggacgtgctttaagcata
gaaactggagaattagctcgtaaagctaatggatcagctgtagttcgtatgggaaatact
agcttattagccactgtagtaatttcaaaagaatccaaagaggattttaaatttatacct
cttactatcgattatagagaaaaatattcagctggcggaaaaattccaggtggatatata
aaacgtgaagggaggccttatgatgaagaaatattaactatgagattagtagatcgttta
ttacgtccactttttaaagacaattattataatgaaatacaaataatgatatctttgtta
tcatatgatataaatgtattgcctgatggattagctggattagtagcttctactgcggtt
tctatatcagaaatatcttttcaggggcctgtatcaacagttcgtataatacgaattaat
gatgcatttattattaatcctgggattgaagaaattaaaaaatcagatttctatttagat
ttagatttagatttagatttaatagtaggaggtactaataattatattattcttgtagaa
ggagaaatgagagagatatctgaaatagagatgatggaagcaatagttaaagcacataag
tatattcaattacaaattgaagctcaaattagtttaattactaaaaataaaaaatttata
aaaaaaaaattatacaaaattgaattgtataattattattataaatatattaattttaat
ttaaacgttttttatataaaagaaaaaataaaatttatctcttatgaagagatagattat
atctataaaagttgtttatttaaacaaaaacgttcaaataaaatttataatattttaaaa
aaaataaaatttcatttttataatgaaagcattgtaattaataatcttgaaatagatatt
atctttgatgaaataaaaaaagaaataataaaaaatattctttttaaagaaaatattcgt
ttagatggtagatcattagatgatattagaaatatttgtagtcaagtagattgtttgcct
ggtgtacatggatctgcaatttttacaagaggagaaacacaagcattatctacagttact
ttaggttcatcattagatgttaataaaattgataatgctattatgcgagctaaacaaaga
ttttacttacattataattttcctcctttttcaactggagaaattaaattattaaaagga
gtatcaagacgtgaaattggacatggaaatttagctcaacgtgctttaaaaaatataata
ccaactacttatactataagagtagtatcagatgtattagaatcaaatggatcttcttct
atggctactgtatgtgctagtacattagcattaatggattcagggattattgtgaaaaga
cctgtttcaggaatatctatggggttaattatgaattatttaacgggtgaagccataatt
ctttcagatctattaggagatgaagactatataggggatatggattttaaaattacaggt
actgaatatggtatgacagcatgtcaaatggatattaaaatctctggaattacttatgat
gtattatcatatacaatttttaaagcaaaaaaagggttattatttataataaaaaagatg
cttacaactttaagttgtcctagaaaatcactgaatattacagctactaaaatttatact
ttttatataccaaaaaaattgataggagctgtaattggttctggaggaaaaagaatacaa
gaaatacaagtttctacagaaactaatattaaaataaaagaaaaaaattatttaggtgta
attgaaattttaggaaaaaatgaaacaaaactaaaaatagcaattttaaaaataaaaaac
attacttttgttcctaaagtaggaacaatttataaagctaaagttaaaaatataaaaaaa
tttggtgtttttgttaaaatatctaaatatttagaagggttattacatatatatgaaata
tcttggttaactaaagtagaaagttttataagaaaaggagatataatctctgtaaaatat
ttgggtaaaaataataaattcagaaaaattaaattatctcataaaatgattttttctcga
tattatttaaataaaaacttaaaatga
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