Candidatus Karelsulcia muelleri GWSS: SMGWSS_245
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Entry
SMGWSS_245 CDS
T00630
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smg
Candidatus Karelsulcia muelleri GWSS
Pathway
smg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMGWSS_245 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smg03021
]
SMGWSS_245 (rpoA)
03400 DNA repair and recombination proteins [BR:
smg03400
]
SMGWSS_245 (rpoA)
Enzymes [BR:
smg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMGWSS_245 (rpoA)
Transcription machinery [BR:
smg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMGWSS_245 (rpoA)
DNA repair and recombination proteins [BR:
smg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMGWSS_245 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ABS30642
UniProt:
A8Z691
LinkDB
All DBs
Position
225798..226517
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AA seq
239 aa
AA seq
DB search
MVFLKFKQSKNLRVLKLTPEEGLFKIEPLFPGWGVTIGNTLRRVLLSSLEGYAISSVKIE
GVNHEFSTIKGVIEDMTEIILNLKKVRFKKNKKKENFESEVFNMIISNDKEEITAGDLGK
YINKFDILNPDLIILNKQKLISLDISIVIKKGIGYVPSEENKENLIGSGSIPMDSIFTPI
KNVKYKIDNCSINKNSNYESLLLEIKTDGSINPRDALTNASNILIQHLKMFIYETRKKK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtttttttaaaatttaaacaatcaaaaaatttaagagtattaaaattaactcctgaa
gaaggattatttaaaatagaaccgttatttcctggatggggagtaacaattggaaatact
cttagaagagtgcttttatcttctttagaaggatatgcaatatcgtcagttaaaattgaa
ggagtaaatcatgaattttctacgataaaaggggtaatagaagatatgacagaaattatt
ttaaatctgaaaaaagtacgttttaaaaaaaacaaaaaaaaagaaaattttgaatcagaa
gtatttaatatgataatatctaatgataaagaagaaataactgctggtgatttaggaaaa
tatattaataaatttgatatattaaatcctgatttaataattttaaataaacaaaaatta
atatctttagatataagtattgtaataaaaaaaggtataggttatgtaccttcagaagaa
aataaagaaaatttgataggatcaggatcaattccaatggattctatatttactcctata
aagaatgtaaaatataaaatagataactgtagtatcaataaaaattcaaactatgaaagt
ttgttattagaaataaaaactgatgggtctataaatcctagagatgcattaaccaatgcc
tctaatatattaatacaacatttaaaaatgtttatatatgagacacggaaaaaaaaataa
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