Candidatus Karelsulcia muelleri DMIN: DMIN_02090
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Entry
DMIN_02090 CDS
T01203
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
smh
Candidatus Karelsulcia muelleri DMIN
Brite
KEGG Orthology (KO) [BR:
smh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DMIN_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smh03021
]
DMIN_02090
Transcription machinery [BR:
smh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DMIN_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
GPW_gp25
Hemolysin_N
Motif
Other DBs
NCBI-ProteinID:
ADE35488
UniProt:
D5D8W6
LinkDB
All DBs
Position
complement(205356..206384)
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AA seq
342 aa
AA seq
DB search
MKKQNIITIPESESESLSLDKFLLEISNIPLLSQEEEFFWAKLARVGYIYNSEIESILKK
LKIFKNFKKLNKLKKLNKLKKLKKIKKLTAVLIKKFDKKGIKKYALDNLVKANLRFVISI
AKQYQNQGLSLSDLINEGNFGLIKGINRFDERKGFKCISYCVWWIRQSILQAISDKARCV
RYPTNKLAFYNKVNKTYSKLEQKLKMPPSIKYISDYLNVSEKDVEEALINSIKHTSLDAP
LGEGDNSNLYDVIKIDESPKTDHSLEKESLQQDIKILLETLSERESQIITLHYGLGCFSM
NLEKIAYLLKLTRERCRQIEMHAIKRLKKSSRKEILLSYLCK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaaacattataactattcctgaatcggaatctgagtctttatctttagat
aaatttttacttgaaataagtaatataccattattaagtcaagaagaagaatttttttgg
gctaaattagctcgagtaggatatatttataattctgaaatagaatcaatattaaaaaaa
ttaaaaatattcaaaaatttcaaaaaattaaacaaattaaaaaaattaaacaaattaaaa
aagttaaaaaaaataaaaaaattaaccgcagtattaataaaaaaatttgataaaaaggga
ataaaaaaatacgcacttgataatttagttaaagcaaatttaagatttgtaatttctata
gcaaagcaatatcaaaatcaaggattaagtttatctgatttaattaatgagggaaatttt
ggtctcataaaaggtataaatcgttttgatgaaagaaaaggatttaaatgtatttcttat
tgtgtatggtggataagacaatctatattacaagctatatcggataaagctcgttgtgta
cgttatcctacaaacaaactagctttttataataaagttaataaaacatattctaaatta
gaacaaaaacttaaaatgcctccatcaataaaatatattagtgactatttaaatgtcagt
gaaaaagatgttgaggaagctctgataaattcaattaaacatacatctttagatgctcct
cttggagaaggagataattctaatttatatgatgtgataaaaattgatgaatcacctaaa
actgatcactctttagaaaaagaatctcttcaacaagatataaaaatcttattagaaact
ctttcagaaagagaatctcaaataattacattacattatggattaggatgtttttctatg
aatttagaaaaaatagcatatctattaaaattaactagagaacgttgccgacaaatagaa
atgcatgcaattaaaagattaaaaaaatcttctcgtaaagaaatattactatcatactta
tgtaagtag
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