Candidatus Karelsulcia muelleri DMIN: DMIN_02410
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Entry
DMIN_02410 CDS
T01203
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smh
Candidatus Karelsulcia muelleri DMIN
Pathway
smh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DMIN_02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smh03021
]
DMIN_02410
03400 DNA repair and recombination proteins [BR:
smh03400
]
DMIN_02410
Enzymes [BR:
smh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DMIN_02410
Transcription machinery [BR:
smh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DMIN_02410
DNA repair and recombination proteins [BR:
smh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DMIN_02410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADE35520
UniProt:
D5D8Z8
LinkDB
All DBs
Position
224062..224781
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AA seq
239 aa
AA seq
DB search
MVFLKFKQSKNLRVLKLTPEEGLFKIEPLFPGWGVTIGNTLRRVLLSSLEGYAISSVKIE
GVNHEFSTIKGVIEDMTEIILNLKKVRFKKNKKKENFESEVFNMIISNDKEEITAGDLGK
YINKFDILNPDLIILNKQKLISLDISIVIKKGIGYVPSEENKENLIVSGSIPMDSIFTPI
KNVKYKIDNCSINKNSNYESLLLEIKTDGSINPRDALTNASNILIQHLKMFIYETRKKK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtttttttaaaatttaaacaatcaaaaaatttaagagtattaaaattaactcctgaa
gaaggattatttaaaatagaaccgttatttcctggatggggagtaacaattggaaatact
cttagaagagtgcttttatcttctttagaaggatatgcaatatcgtcagttaaaattgaa
ggagtaaatcatgaattttctacgataaaaggggtaatagaagatatgacagaaattatt
ttaaatctgaaaaaagtacgttttaaaaaaaacaaaaaaaaagaaaattttgaatcagaa
gtatttaatatgataatatctaatgataaagaagaaataactgctggtgatttaggaaaa
tatattaataaatttgatatattaaatcctgatttaataattttaaataaacaaaaatta
atatctttagatataagtattgtaataaaaaaaggtataggttatgtaccttcagaagaa
aataaagaaaatttgatagtatcaggatcaattccaatggattctatatttactcctata
aagaatgtaaaatataaaatagataactgtagtatcaataaaaattcaaactatgaaagt
ttgttattagaaataaaaactgatgggtctataaatcctagagatgcattaaccaatgcc
tctaatatattaatacaacatttaaaaatgtttatatatgagacacggaaaaaaaaataa
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