KEGG   Sinorhizobium meliloti Rm41: BN406_01016
Entry
BN406_01016       CDS       T02332                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
smi  Sinorhizobium meliloti Rm41
Pathway
smi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN406_01016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smi03019]
    BN406_01016
Messenger RNA biogenesis [BR:smi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BN406_01016
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_3
Other DBs
NCBI-ProteinID: CCM67061
LinkDB
Position
1037361..1039028
AA seq 555 aa
MAQDEELVFLPLGGVGEIGMNLGLYGYGRPGHRQWIMVDCGVTFPGPELPGVDLVLPDIA
FLAEQRRNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRAFEKSRSEIP
ITIFKQGDRINVGPFSVEAVGVNHSIPEPMALVIRTQLGTVVHTGDWKIDLEPSLGPLTD
ESRFRQIGEEGVLALVCDSTNALREGVSPSERQVSESLAKIIADAEGRVGITTFSSNVGR
IRSVAEAAEAAGREVLLLGSSMKRVVDVAREVGLMEGVKPFLAEDEFGYIPRDKVVVILT
GSQGEPRAALAKIARDEMRNVAFSAGDTIVFSSRTIPGNEKAINDIKNGLIEQGIHIITD
SEALVHVSGHPRRTELQQMYQWVKPQILVPVHGEAAHLTAHAELGLQSGIPSVPRLRNGE
MLRLAPGPAEVIDEAPHGRIYKDGTLIGDFEEMGIGERRKLSFAGHVSVSVVLDSRYDFL
GDPDVVPIGLPEFDDEGEAMEDTLYDAVLGAVESIPRAKRKDLAMLQEAVRRAVRSTTNQ
VWGKKPVVTVFITKV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcgcaagatgaagaactggtgttcttgccgctcggcggcgtcggcgaaataggcatg
aatctcggcctttacggctatggaaggccaggtcaccgccaatggatcatggtcgattgc
ggcgttaccttccccggcccggaattgcccggcgtagatctggttctgcccgatatcgcc
tttctggccgaacagcgccgcaacctcaaggcgatcatcatcacgcatgcgcatgaggac
cattacggggccctgaacgacctgtggccgggcctgaacgttcccgtctacgcctcgccc
tttaccgcgggcatgctggaggccaagcgtgcattcgaaaaatcccgcagcgagatcccg
atcacgatcttcaagcagggcgaccgcatcaatgtcggacctttcagcgtcgaagccgtg
ggggtcaatcattcgatccccgagccgatggcactcgtcatccgcacgcaactcggcacc
gtcgtgcacacgggcgactggaagatcgatctcgagccttcgctggggcctctgaccgac
gagtcgcggtttcgccagatcggggaggaaggcgtcctcgcgctcgtctgcgattcgacc
aatgccttgcgcgaaggcgtgtcgccgtccgagcggcaagtctccgaaagtctcgccaag
atcattgccgatgccgagggccgcgtcgggatcaccaccttctcctccaatgtcgggcgc
atccgctctgttgcggaagcggcggaggctgcggggcgggaggtgcttctactcggcagt
tcgatgaagcgcgtcgtcgacgttgcgcgcgaagtcgggctcatggaaggcgtgaagccg
ttcctcgcagaggacgagttcggctacatcccgcgcgacaaggtcgtcgtcatcctgacg
ggcagccagggcgagccgcgcgcggcccttgccaagatcgctcgcgacgagatgcgcaac
gtggcgttttcggccggcgacacgatcgtattttcgtcgcgcaccatccccggcaacgaa
aaagcgatcaacgacatcaagaacgggcttatcgagcaaggcatccacatcatcacggat
agcgaggcgctggtgcatgtttccggccatccgcggcgcaccgagctccagcagatgtac
caatgggtgaagccgcagatcctcgtgccggtgcatggcgaggcggcgcatctgacggca
catgcggagctcgggctgcaatcgggcatcccgagcgtgccgcggctgcgcaatggcgaa
atgctacggcttgcgccgggccccgcggaagtcatcgacgaggcgccgcacggccgcatc
tacaaggacggcaccctcatcggcgatttcgaagagatggggatcggtgaacgccgcaag
ctgtcctttgccggccacgtctccgtcagtgtcgtactcgacagccgctacgactttctg
ggtgacccggacgtcgtgccgatcggccttccggaattcgacgacgaaggcgaggcgatg
gaggacacgctctatgatgcggtgctcggcgccgtggaaagcatcccgcgggcaaagcgg
aaggacctcgcgatgctgcaggaagccgttcgccgcgccgtgcgcagcaccacgaaccag
gtctggggcaagaagccggtcgtgacggtttttatcacgaaggtctga

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