Sinorhizobium meliloti Rm41: BN406_01270
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Entry
BN406_01270 CDS
T02332
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02024
Quorum sensing
smi03060
Protein export
smi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BN406_01270
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BN406_01270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN406_01270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smi02044
]
BN406_01270
Secretion system [BR:
smi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BN406_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
MMPL
SecD-TM1
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
CCM67315
LinkDB
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Position
1301319..1303895
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AA seq
858 aa
AA seq
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MPRLSPFKNILIWLVVLAGLAFALPNLLSREQLADWPTWLPHRQVPLGLDLRGGSHIVLK
VSREDIVAERLQSTIDTIADALRQADIRYTGLSGSGQGLQFRLRDAMKAPAARDALKALV
APVRQGGLFGNSIQELVYEESATSDTLRLRLTDEGIDLRVSDAVAQSIEVVRRRVGEVIA
VVPIIERRGGDRLSVQVPGLDEPQRLKDLLGQRGDVALKWLDSSMPAQQAVDTRPPAGSE
VLYSLDDPPIPYLVERRAFAAAPDFVEAQPGFDPATSEPVVNARIAAGAAARVAPFLQSD
PRKQFAIVLDGQVISTSVLDGALSGDAVRISGNLSEDGANDLAALMRAGPLPVSLTVIEE
RTVGPEDGADAVANGLTAGLIAAIAVAACMIGFYGFFGVVAVIAVIVNVVLIIAVLSVTG
ATLTLPGIAGIILTIGIAVDSNVLIYERLREEARTSGKPLRRALDDGFERVLRSIVDANL
TIFIAGAILLYLGSGAIRGFAVTLAIGSVTTILTAHSLTRRLIRGWYRRRLPQRLPRGIR
TGFFSRADFRFMAIRNPVFILMTALSLASLVLLTSLGLNMGADFRGGSVIELRARTGVAD
GADIRARLDELNLGDVQVEELGSARDVLVRIPSQEAGDNAEQTAVGLVRSELEDQYVFRR
VEVVGPGVSGELTRAGSLAVAAAVLAVLLYVWLRFGRRFAVGAIVATLHDVLLTLGFLVL
TGIEFNLASIAALLTIVCYSLSDTMVIYDRVRENLVRYRRMPLSVLIDTSINQTLSRTVL
TAVTTLLALVALYLFGGSGLVQSFSATLIFGVLVGTVSSIYVAGPLLILFNRRNNRLGGT
QDPAEPDASSETEAKGAV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggttgtcgccgttcaagaatattctcatctggctggtcgtccttgcgggcctc
gccttcgcactgccgaatctcctttccagagagcagctcgcggactggccgacctggctg
ccgcatcggcaggtgccgctcgggctcgatctcaggggcggttcccatatcgtcctcaag
gtcagccgcgaagacatcgtcgcggagcgcctgcaatcgaccatcgacacgatcgccgat
gcgctgagacaggcggatatccgctatacggggctgtccggaagcgggcagggtctgcag
tttcgtctccgcgatgcaatgaaagcaccagcggcgcgtgacgcactgaaggcgttggtc
gcccccgttcgacagggcgggcttttcgggaattccatccaggaactggtctacgaggaa
agcgcgaccagcgacacgcttcggcttcgcctgacggacgagggcatagatctgagggtc
tcagatgccgtcgcccagtccatcgaggtcgtacgccggcgtgtcggcgaagtcatcgcg
gtcgtgccgatcatagagcgtcgcggcggtgaccggctgagcgtgcaggtccccggtctg
gacgagccgcaaagattgaaggatctcctcgggcagcgaggagatgtcgccctgaagtgg
ctggattcctcgatgccagcacaacaggccgtcgatacgaggccgcctgcggggtccgag
gtcctctattcgctggacgatccgccgataccctacctcgtcgagagacgcgcctttgct
gcggcgccggacttcgtcgaggcacagccgggcttcgatccggcaacgagcgaacctgtc
gtcaatgcaaggattgcagccggggctgccgcgcgggtcgcgccgttcctgcagtcggat
ccgcggaagcagttcgcgatcgtgctcgacggacaggttatctcgacgtccgttctggat
ggcgcgctttccggtgatgccgtccggatttccggaaatctctcggaggacggggcgaac
gatcttgccgccctgatgcgggccggcccgcttcccgtttcgctgacggtcatcgaggag
cgcaccgtcggtcccgaggacggggctgacgccgttgcaaacggcctcacggcgggcctg
atcgcggccattgccgtagcagcctgtatgatcggcttctacggcttcttcggtgtcgtg
gccgtcattgccgtcatcgtcaacgtcgtgctgatcatcgcggtcctgtccgtcaccggc
gccacgctgacgctgcccggaattgccgggatcatcctcacaatcggaattgcggtcgat
tcgaacgttctcatctacgagcggctcagggaagaagcgcgcaccagcggcaaacccttg
cgaagggcgctggacgacggattcgagcgcgtcttgaggagcatcgtcgacgcgaatctg
acgatattcattgccggcgccatcctcctctatcttgggtcgggcgctattcggggtttt
gcggttacgcttgccatcggcagcgtcaccaccattctgacggcgcacagcctgacacgc
cgccttattcgcggatggtatcgccgccgcctgccgcagcgtctgccgcgcggcattcgg
accggatttttcagccgggcggatttccgtttcatggcgatccgcaatccggtctttatt
cttatgacggcattgtcgcttgcttcgctggttctcctgacgagcctcgggctcaacatg
ggagcagatttcaggggcggctccgtcatcgaattgagagcacggaccggcgtcgccgat
ggtgccgacatccgtgcccgtctcgacgaattgaacctcggagacgttcaagtcgaggaa
cttggatcggcgcgagacgttctcgtccgtatcccgtcgcaggaagccggcgacaatgcc
gagcagacggccgtcgggctggttcgctccgaacttgaggatcaatatgtcttccggcgt
gtcgaggtggttggccccggtgtttccggagagttgacgcgggcagggtcgctcgcggtt
gccgcagccgtgctggccgttctgctttacgtgtggcttcggttcggccggcgatttgcc
gtcggagccatcgtcgcgacgttgcacgatgtgctgctgacgctcgggttcctcgttctg
accggcatcgaattcaatctcgccagcatcgcagcgctgctgacgatcgtgtgctactcg
ctgagcgacaccatggtgatttatgatcgagtccgggagaatctggtgcgctatcgaagg
atgccgctctctgtcctgatcgacacgtcgatcaaccagaccctgtcgcggaccgtcctg
accgccgtgacgacgctccttgctctcgttgcgttgtatctgttcggaggcagtggtctc
gtccaatccttcagcgcaacactcatattcggtgtgcttgtgggcaccgtgtcttcgatc
tatgtcgcgggaccgctgcttatcctcttcaatcgccgaaacaatcgtctcggaggcacg
caggacccggcggagccggatgcctcgtcggagacggaagcaaagggtgcggtgtga
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