Sinorhizobium meliloti Rm41: BN406_01279
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Entry
BN406_01279 CDS
T02332
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00260
Glycine, serine and threonine metabolism
smi00630
Glyoxylate and dicarboxylate metabolism
smi00785
Lipoic acid metabolism
smi01100
Metabolic pathways
smi01110
Biosynthesis of secondary metabolites
smi01200
Carbon metabolism
Module
smi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN406_01279 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN406_01279 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BN406_01279 (gcvP)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
BN406_01279 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CCM67324
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Position
complement(1311336..1314200)
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AA seq
954 aa
AA seq
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MSMPKDFTFTDYKPYDFANRRHIGPSPAEMDEMLKVVGYPSLDALIDDTVPPSIRQRTPL
AWGAPMTEREALDKLRETANRNRKLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAIAERVAKSKAKAFFIDE
NCHPQTIALLKTRAEPLGWQIVVGDPFEDLDAAGVFGAIFQYPGTYGHVRDFSGLIAKLH
GQGAIAAVAADPLALALLKSPGEMGADIAIGSTQRFGVPVGYGGPHAAYMAVKDAYKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPDGI
KAIAQSVHQKTVRLAMGLEKLGYTVEPDVFFDTITVEVGKLQGIILKAAVAEEVNLRKIG
TTRIGISLDERSRPVTLEAVWRAFGGDFKVEEFEPDYRLPQELLRTSAYLTHPIFHMNRA
ESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQALG
YQHLIEDLSQKLCAITGYNAISMQPNSGAQGEYAGLLAIRAYHIANGNEHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVSDAGEIDMDDFRAKAEQYADTLSCCMITYPSTHGVFEENV
REVCEVVHKHGGQVYLDGANMNAMVGLFRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHPQTDGHEGAVSAAPFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYVAARLKGAYDVLYKSAKGRVAHECIIDTRPLAESAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCDAMLAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVG
DWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCTCPPIESYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccaaggactttaccttcaccgattacaagccttacgacttcgccaatcga
cgtcacatcggcccttcgccggccgagatggacgagatgctgaaggtcgtcggctatccg
agcctcgacgcgctcatagacgacaccgtgccgccgtcgatccgccagcggacgccgctt
gcctggggcgcgccgatgaccgagcgcgaggcactcgacaagctgcgcgagacggcgaac
cgcaaccggaagctcgtctccctgatcggtcagggctactacgggaccatcaccccgccg
gtcatccagcgcaatatcctcgagaatccggcctggtacaccgcctatacgccctatcag
ccggaaatcagccaagggcggctggaagccctgctcaactaccagaccatggtttgcgat
ttgaccggcctggacgtcgcgaacgcctcgttgctcgacgaggcgacggcggcagccgaa
gcaatggccattgccgagcgcgtcgcaaagtccaaggcgaaggcgtttttcatcgatgag
aactgccatccccagacgattgcgctcctgaagacccgggcggagccgctcggctggcag
atcgtcgtcggcgatccgttcgaggatctggacgctgccggcgtcttcggcgcgattttc
cagtaccccggtacctacggccatgtccgcgacttctcgggcctgatcgccaaactccat
gggcagggggcaatcgccgccgtagcagccgatccgctggcgctggcgcttctgaagtct
ccgggtgaaatgggcgccgacatcgcgatcggttcgacccagcgcttcggcgttccggtc
ggctacggcggaccgcacgccgcctatatggcggtcaaggatgcctataagcgctccatg
cccggccgcctcgtgggcgtgtcggtcgatgcgcggggcaaccgcgcctaccggctgtcg
ctccagacccgtgaacagcatatccggcgcgaaaaggcgacatcgaacatctgtaccgcg
caggtgctgcttgccgtcatggcctccatgtatgcggtcttccacggtccggacggaata
aaggcgatcgcccagagcgtgcaccagaagacggtccggcttgccatgggattggagaag
ctcggctataccgtcgagccggatgtcttcttcgatacgatcaccgtcgaagtcggcaag
ctgcaaggcatcatcctcaaagccgccgtggccgaggaggtaaaccttcgcaagatcggc
acgaccaggatcggcatcagtctcgacgagcgttcgaggccggtcacgctcgaggccgtc
tggcgcgccttcgggggcgatttcaaggtcgaggagttcgagccggactaccgcctgccg
caggaactgctgcgcaccagcgcctatctcacccatccgatcttccatatgaaccgcgcc
gagagcgagatgacgcgttacatgcgccgcctcgccgatcgcgatcttgcgctcgaccgc
gcgatgatcccgctcggctcctgcacgatgaagctcaacgcgaccgcggagatgctgccg
atcacctggccggagttctcggaaatccatcccttcgtgccggccgaccaggcactcggc
tatcagcatctcatcgaagacctgtcgcaaaagctgtgcgcgatcaccggctacaatgcg
atctcgatgcagccgaactcgggtgcccagggtgaatatgccggtctgctcgcgatccgc
gcctaccatatcgccaacggcaacgagcatcgcgacgtctgcctgataccgacctcggcg
cacggcaccaacccggcctcggcgcagatggccggcatgaaggtggtggtcgtcaaggtg
agcgacgccggcgagatcgatatggacgatttccgcgccaaagcggagcagtatgcggac
accctctcctgctgcatgatcacctatccctcgacgcacggcgtgttcgaggagaacgtc
cgcgaagtctgcgaggtcgtgcataagcacggtggccaggtctatctggacggcgccaac
atgaatgcgatggttggccttttccgccctggcgacatcggctcggatgtcagccatttg
aacctgcacaagaccttctgcattccgcatggcggcggcggtcccggcatgggcccgatc
ggcgtcaagtcgcatctcgcccccttccttccgggacacccgcagaccgacgggcacgag
ggcgccgtatccgccgcaccgttcgggtcggcctcgatcctgccgatctcctggagctac
tgcctgatgatgggcggcgaaggcctgacgcaagcgaccaaggtggcgatcctcaacgcc
aattacgtcgccgcccggctgaagggtgcctatgacgtgctctacaagtcggcgaaaggc
cgggtcgcgcatgaatgcatcatcgatacccgtccgctcgccgaaagcgccggcgtcacg
gtcgatgacgtcgccaagcgcctgatcgactgcggcttccatgcaccgacgatgagctgg
ccggtcgcgggcacactgatgatcgaacccacggaatcggaaacgaaggccgagctcgac
cgcttctgcgacgccatgctggcaatccgcgaagaggcccgcgccatcgaggacggccgg
atggacaaggtcaacaatccgctgaagaacgcgccgcatacggtcgaggacctcgtcggc
gactgggaccggccctattcgcgcgagcaggcctgcttcccaccgggcgccttccgcgtg
gacaaatactggtcgccggtcaaccgtgtcgacaatgtctatggcgaccgcaatctcgtc
tgcacctgcccgccgatcgagagctacgcggaagcggcggaatga
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