Sinorhizobium meliloti Rm41: BN406_02088
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Entry
BN406_02088 CDS
T02332
Symbol
ydcS
Name
(GenBank) Putative ABC transporter periplasmic-binding protein ydcS
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN406_02088 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_02088 (ydcS)
Transporters [BR:
smi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN406_02088 (ydcS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
CCM68133
LinkDB
All DBs
Position
2136290..2137450
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AA seq
386 aa
AA seq
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MKQILKSCTALTLSLGLAAPALAQEPLKELGQGEGALSIVAWAGYIERGETDKNYDWVTD
FEKKTGCKVSVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPINTDLIPSWK
TIDERMQNAPWHTANGVHYGTPYVWGPNVLMYNTEAFKDQPPKSWKVVFEEMTLPDGKSN
KGRVQAYDGPIHVADAANYLMAHKPDLGIKDPYELNEDQYKAALDLLRTQRTLVGRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLMQAEKQPIASVIPEEGVTGWADTTMLHADSEHPNC
AYMWMEHSLSPKVQGDVSAWFGANPSVGAACKGNELLTDEGCKTNGYDDFEKVKFWKTPV
TKCESQGECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcctgaaatcctgcaccgcacttaccctgtcgctgggcctcgccgcccct
gcgctggcgcaggagccgctgaaagagctcggtcagggcgaaggtgcgctctcgatcgtc
gcctgggcgggctatatcgagcgcggcgagaccgacaagaattacgactgggtcaccgat
ttcgagaagaagaccggttgcaaggtcagcgtcaagacggcggccacctccgacgaaatg
gtcgcgctgatgaacgaaggcggtttcgacctggtgaccgcctccggagacgcatcgctg
cgcctcgtcgctggaaagcgcgtccagccgatcaataccgatctcatccccagctggaag
acgatcgacgagcgcatgcagaacgcgccgtggcacaccgccaacggcgtccactacggc
accccctatgtctggggcccgaacgtgctgatgtacaataccgaagccttcaaggatcag
ccgccgaagagctggaaagtcgtcttcgaggagatgacgctgcccgacggcaagtccaac
aagggccgcgtccaggcctatgacggcccgatccatgtcgcggacgccgccaactacctg
atggcgcacaagcccgatctcggcatcaaggacccttacgagctcaacgaagatcagtac
aaggccgcactcgatctgttgcgcacccagcgcaccctcgtcggccgctactggcacgac
gcgatgatccagatcgacgacttcaagaacgagggcgtcgtcgcctccggctcctggccc
ttccaggtcaacctgatgcaggccgagaagcagccgatcgcctccgtcatcccggaagaa
ggcgtgacgggctgggccgatacgacaatgctgcatgccgacagcgagcatccgaactgc
gcctatatgtggatggagcattcgctctcgccgaaagtccagggagatgtatccgcctgg
ttcggtgccaacccctccgtcggtgccgcctgcaagggcaacgagcttctgaccgacgaa
ggttgcaagaccaacggctacgacgacttcgagaaggtcaagttctggaagacgccggtg
acgaaatgcgaaagccagggcgagtgcgtgccctatcatcgctgggtctccgactatatc
ggtgtgatcggcgggcggtaa
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integrated database retrieval system
