Sinorhizobium meliloti Rm41: BN406_02089
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Entry
BN406_02089 CDS
T02332
Symbol
ydcT
Name
(GenBank) putative ABC transporter ATP-binding protein YdcT
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN406_02089 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_02089 (ydcT)
Transporters [BR:
smi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN406_02089 (ydcT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_22
SMC_N
nSTAND1
AAA_16
AAA_30
ABC_ATPase
AAA_29
nSTAND_NTPase5
LupA
Motif
Other DBs
NCBI-ProteinID:
CCM68134
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All DBs
Position
2137652..2138650
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AA seq
332 aa
AA seq
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MNAAVLFDNVSRYFGAVRAVDRVNLEIAEGEFFAMLGPSGSGKTTCLRLMAGFEQPTGGH
IEIFGETAEGVPPYRRSVNTVFQDYALFPHLSILDNVAYGLMVKGVGREERRRAAEDALA
MVKLPGYGTRRPGQLSGGQRQRVALARALVNKPKVLLLDEPLGALDLKLREQMQEELKTL
QKSLGITFVFVTHDQGEALSMADRIAVFNEGRIQQLGSPEEVYNRPQTRFVADFVGSSNV
LSEDLCRRLGLKASFASLRPEAVAIAPPSDRALSLSGTVASQSFLGATNRILIDVEGARI
AVASPAARGVPAVGSPVTISFAAHDLHPMEDA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgtcctcttcgacaatgtttcccgctatttcggcgccgtgcgtgccgtc
gatcgcgtgaacctcgagatcgccgagggcgagttcttcgcgatgctcggtccatcgggc
tcgggcaagaccacctgcctgaggctgatggcaggcttcgagcagccgaccggaggccac
atcgagatcttcggcgagaccgccgaaggcgtgccgccctaccggcgcagcgtcaacacc
gtctttcaggactacgccctcttcccgcatctctccattctcgacaacgtcgcctatggc
ctgatggtcaagggcgtcggacgcgaggagcgccgcagggcggccgaggatgcgctcgcc
atggtgaagcttccgggctacggcacgcgccggcccggacagctttccggcggccagcgc
cagcgcgtggcgctcgcccgcgcgctcgtcaacaagccgaaggttctgcttctcgacgag
ccgttgggcgcgctcgatctgaagctgcgcgaacagatgcaggaggaattgaaaacgctg
cagaagtcgttgggcatcaccttcgtcttcgtcacccatgatcagggcgaagcgctctcg
atggccgacaggatcgccgttttcaacgagggccgtatccagcaactgggaagcccggag
gaggtctacaaccgtccgcagacccgtttcgtcgccgatttcgtcggctcctccaacgtg
ctttccgaggacctctgccgccgactggggctgaaggcttccttcgcgagcctgcgcccg
gaggctgtggccattgcgccgccgagcgaccgagcgctgagcctttccggcactgtcgct
tcgcagagcttcctcggcgccaccaaccgaatcctgatcgacgtcgagggtgcccgcatc
gccgtggcgagcccggcggcgcgtggcgttccagcggtcggcagtccggtcacgatcagc
ttcgccgcgcacgacctccacccgatggaggacgcatga
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