Sinorhizobium meliloti Rm41: BN406_03375
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Entry
BN406_03375 CDS
T02332
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN406_03375 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smi03019
]
BN406_03375 (pnp)
03016 Transfer RNA biogenesis [BR:
smi03016
]
BN406_03375 (pnp)
Enzymes [BR:
smi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BN406_03375 (pnp)
Messenger RNA biogenesis [BR:
smi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN406_03375 (pnp)
Transfer RNA biogenesis [BR:
smi03016
]
Prokaryotic type
tRNA degradation factors
BN406_03375 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
CCM69420
LinkDB
All DBs
Position
3556058..3558211
Genome browser
AA seq
717 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKNDTQVIITVMQH
DLENNPDVVAMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTQEAVLMVESEAKELPEDVMLGAVVFGQKGFQPVIDAVIRLAEVAAKEPREFNPEDHSA
LENAMLSIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGVENPAHTAEEIAAVFK
HLQAKIVRWNILDTKSRIDGRDLVTVRPIVAEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITEEIMGVALNQAKGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIDDDGTVKIA
SASAKEIEAARKWIHSIVAEPEVGQVYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVAEKSEKKDGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacacacaaggtagaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggaaaaatcgcgcgtcaggccgatggtgccgttctcgcgacctacggcgaaaccgtcgtg
ctcgccacggtggtttcggcgaaggcaccgaagccaggccaggatttcttcccgctcacc
gtcaactatcaggaaaagacctacgctgcgggcaagatccccggcggctatttcaagcgt
gagggccgccccagcgaaaacgagacgctggtgtcgcgtctgatcgaccggccgatccgt
ccgctcttcccggacggctacaagaacgacacccaggtcatcatcacggtcatgcagcat
gacctcgagaacaacccggacgtcgtcgcgatggttgcggcatccgctgcattgacgctt
tccggcgttcccttcatgggtccggtcggcggtgcccgcgtcggctacatcaacggcgaa
tacgttctcaacccgcatctcgacgaaatggacgaatccacgctcgacctcgtcgtcgcc
ggcacgcaggaagcggtgctgatggtggaatcggaagcgaaagagctgccggaagatgtc
atgctcggcgccgtcgttttcggccagaagggcttccagccggtgatcgacgctgtcatc
aggcttgcggaagttgccgccaaggagccgcgcgaattcaatccggaagatcactccgct
ctcgaaaatgcgatgctctcgatcgccgaagacgagctgcgcaacgcctataagatcacc
gagaaggccgcgcgctatgccgccgtcgatgcggtaaaggcaaaggtcaaggagcatttc
ctgccggaaggcgtcgagaacccggcccataccgccgaagagattgccgctgtcttcaag
cacctgcaggccaagatcgttcgctggaacatcctcgacacgaagagccgcatcgatggc
cgcgacctcgtcacggttcgcccgatcgtcgccgaagtcggcatcctgccgcgcacgcac
ggttcggcgctctttacccgcggtgaaacgcaggcgatcgtcgttgccacgctcggcacc
ggcgaagacgagcagtatgtcgattccttgactggcatgtacaaggaaaacttcatgctg
cattacaacttcccgccctattcggtcggtgaaaccggccgcatgggttctccgggccgc
cgcgaaatcggccacggcaagctcgcctggcgcgccatccatccgatgctgccgaccgcg
gaacagttcccctacacgctgcgcgtcgtttccgagatcaccgagtccaacggttcgtcc
tccatggcaaccgtctgcggcacgtcgctcgcactgatggacgcgggcgttccgctcgcc
aagccggttgccggcattgccatgggcctcatcaaggaagacgaccgtttcgccgtcctc
tccgacattctcggcgatgaagaccacctcggcgatatggacttcaaggtcgcgggcacg
gatgccggcatcacctcgctgcagatggacatcaagatcgaaggcatcaccgaagaaatc
atgggtgttgccctcaaccaggccaagggaggccgcctgcacattctcggcgaaatggcc
aaggccatctccgagagccgcggccagctcggcgagttcgcaccgcgcatcgaagtcatg
aacattccggtcgacaagattcgtgaagtcatcggctcgggcggcaaggtcatccgcgaa
atcgtcgaaaagaccggcgccaagatcaatatcgacgacgacggcaccgtcaagattgcg
tcggcttccgccaaggagatcgaggccgcccgcaagtggatccactcgatcgtcgccgag
ccggaagtcggtcaggtctatgaaggcactgtcgtcaagacggccgatttcggcgccttc
gtcaacttcttcggcgcccgcgacggcctcgtccacatctcgcagctcgcttccgagcgc
gttgccaagaccaccgacgtcgtcaaggaaggcgataaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggttcgtctctccatgaaggtcgtagaccaggcgaccggcaag
gaagtcgttgccgagaagagcgaaaagaaggacggcggcgaagccgccgagtaa
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