Sinorhizobium meliloti Rm41: BN406_03978
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Entry
BN406_03978 CDS
T02332
Name
(GenBank) outer membrane autotransporter barrel domain-containing protein
Organism
smi
Sinorhizobium meliloti Rm41
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
CCM70260
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All DBs
Position
pSYMA:complement(464607..469583)
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AA seq
1658 aa
AA seq
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MAKRSRRSLLATTALVSCLVGLVTTVSASAQTVTVSGDVSPFSATSPDWNVGGDIEIGVT
GPGALSIEGGGTVTTTVGVLGLTSASTGAATVTGAGSTWTNSDVLFVGVQGSGTLIIEEG
GAISNTDAYIGHASGTGTATVTGAGSAWTNSGSLYVGNGGVGTLSIEDGGGVTGIRGFIG
SDPGSIGRATVSGAGSSWTNSGLFFVGDGGDGTLEIENGGTVSNSFAYVGLAEGAVGTVT
VSGAGSAWTNNGELTIGVSGAGALTVAGEGAVGNTTGILGYGAGSTGTANVTGAGSTWTN
TRDLIVGRSGTGALNIEDGGSVSNAAGSIGQLMGSSGEAVVAGVGSAWANTGSLTVGYGG
DGALTVKDGGAVSNRIGYIGFSVGSSGVATVTGDASTWVNSGDLLVGYSGKGILSIENGG
SVTNRVGAVGFSSGLSGEVAVSGAGSTWTNDSSLFIGTFGTGTLTIADGGAVSSADGYIG
RNSGSIGAVIVRDSGSSWTSSSSLYVGNAGFGTLNIADGGAISAPQLRIADVTGSTGTLN
IGAAAGDAAAAAGTLSAELVQFGSGTGSLNFNHTETNYAFAPAISGAGAINQIAGTTSLT
GDSSGFAGPTSISGGVLLVDGSLGEDASTVGVANGGGLGGMGTIGGSVIVADGSLIGVQG
RTLSMSSLALGEDSTVDATLGVAGDTALFDVSGDLTLDGTLNVTDAGGFGAGIYRLIDYG
GDLTNLGLDIGTTPAGVDAADLSIQTVIDQQVNLVSTSGAELLFWDGGDAGLHNNGSIEG
GDGIWDATNANWTEQDGVVNGAMRPMPGFAVFQGASGTVTVDDSPGPISATGMQFAVDGY
VIEGDAIELAGDGSESLIRVGDGSAAGAGYTATIASNLTGAGSLVKTDLGTLILEGDNTY
QGGTELRNGTLSVSSDTNLGAASGDITFAGGMLASTASFDSARAVVLGSNGLFDVADATT
LGLSGTISGAGDLVKRGTGTLELSGDNAYGNTLVEAGTLIGDAGTISGNIGNAGTVVFDQ
AADTSFAGDIVGLGGSTGTMIKRDAGTLTLAGSSRLDWTVDAGGLVSATNRFVGDLAIGA
DGGFTFDQAYAGSYAGTISGAGALLLIGGGAVTLTSDSSGFVGTTALSDMTLVVNDALGG
SLSILDGGRLEGIGTVGTTTVASGGTLAPGNSIGTLTVNGDLSFAVGSRYEVEANPEGTD
SDLLHATGNVTLDGGAVAHIGATGEYELRSTYTILSADGSLSGAFDDVTSDFAFLTPDLL
YDHGAGTVVLELVRNDRNFASLALTSNQIATAQGIESIAFDAGHAVYDAIAQLADDDHLI
RASFDALSGEIHASAITALIEDSRFIRNAANDRIRAAFGDTGATVTPVLAYGPGGAPTLV
AADHVGPVFWSHGFGSWGSTDGDGNAASLDRSTGGLLVGADTALGDWRVGLLAGYSQSSF
DAQDRASSGSSTNYHLGLYGGTEWGDLALRTGAAYTWHDIETKRMVAIRGLADALTGDYS
AATFQVFGELAYGLELDSGSRLEPFANLAHASLHRDGFAERGGAAALSGVSETTGMTFTT
LGLRGEHNLTLGTMDATLNGTVGWRHAFGDTTPESTHAFSAGDAFTIAGAPMSKDTAIIE
AGLDLNLTPDAAFGLSYTGQLSSDAADHGFKANLNVRF
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggtcccgccgctcgcttctggctaccaccgcccttgtttcctgtcttgtc
gggttggtgactaccgtttccgcatcagctcaaaccgtgacggtttccggcgatgtaagt
cctttttcggctacgtcacctgattggaacgtggggggagacatcgaaatcggcgtaacc
ggtcccggtgcgctgagcatcgagggcggcggcacggtcaccacgacagttggcgttctc
ggtctcacttcggcctccacaggagcggcgacggtgaccggtgccggctccacctggacg
aacagcgacgttctctttgtcggcgttcaaggctccggcactttgatcattgaggaaggc
ggcgcaattagtaatactgatgcctacatcggtcatgcctcgggtacgggcacggcgacg
gtgaccggtgccgggtccgcctggacgaacagcggctccctctatgttggcaatggcggc
gtcggcacgctgagtatagaagatggcggcggtgtcaccggtatacgtggctttatcggc
tccgacccgggctcgatcggaagggcgacagtaagcggagccggatcgagctggacgaac
agcggcctgttttttgtcggagatggcggcgacggcacgcttgagatcgaaaatggcggc
accgtcagcaactcgttcgcctatgtcggcttggcggagggcgccgtcggcaccgtaaca
gtgagtggagccggatcggcttggacgaacaacggcgaactcaccatcggtgtttccggg
gccggtgcattgaccgtcgcgggcgaaggcgcggtgggcaatacaacaggaattcttggc
tacggtgctggttcgaccggaaccgccaacgtgaccggcgcaggatcgacctggacgaac
acccgcgacctgattgtcggccgatcgggcactggcgcactcaacattgaggatggtggc
tcggtcagcaacgctgccggcagcatcggtcagttgatgggctccagcggagaggccgtg
gtggcaggtgtcggctctgcctgggcgaacaccggttcgctcactgtcggctatggcggc
gatggcgcgttgaccgtcaaagacggcggcgcggtcagcaatagaattggttatatcggc
ttcagtgtcggctccagcggcgtggcgactgtgacgggtgatgcctctacctgggtgaac
agcggcgatctcctggtcggctattccggcaagggcatcttatccattgagaacggcggt
tcggtcaccaacagggtgggtgccgtcggattttcgtcgggcctgtccggcgaggtggcc
gtaagcggcgcgggttcgacctggacgaacgatagctcgctctttatcggcacgttcggc
accggcacgttgaccatcgccgatggcggagcggtatccagtgctgatggttacatcggt
cgcaattcgggctcaatcggtgcggtgattgtgcgggactccggctcgagctggacaagc
agctccagcctctacgtcggcaatgccggcttcggcacgctcaacatcgccgacggcggc
gcgatttcagcgccgcagctcaggatcgccgacgtcaccggcagcaccggtacattgaat
atcggcgcggcggcgggcgacgcagccgcagcggcaggaacgctttcggccgaactggtg
caatttggctcgggcacgggctcgctcaacttcaaccataccgagacgaactatgcgttc
gcgccggcgatcagcggtgcgggagcgatcaaccagatagccggtacaaccagcctgacc
ggcgacagctccggctttgccgggcccacctcgatttcgggcggcgttctgctggtcgac
ggcagccttggtgaagacgccagcaccgttggcgttgccaatggcggcggactgggtggc
atgggcacgattggtggctcagtgattgtggcagacggcagcctgattggagtccagggc
cggacattgtcgatgagctctttggccctcggcgaagattcgaccgtcgacgcgacgctc
ggcgtggcgggcgataccgccctgttcgatgtgagcggtgacctgaccctggatggaacc
ctcaacgttaccgacgccggcggcttcggcgcgggcatctaccggctgatcgactatggc
ggcgatcttaccaacctcggactggatatcggcacgacaccggccggtgtcgatgctgcc
gatctctcgatccagaccgtcatcgatcaacaggtcaatctggtgtccacgtccggcgcc
gaactcctgttctgggacggcggcgatgccggccttcacaacaatggcagtatcgagggc
ggtgacggcatctgggatgcgaccaatgccaactggacggaacaggatggcgtggtcaat
ggcgcaatgaggccaatgccaggcttcgctgtgtttcagggcgcaagcggcaccgtaacg
gttgacgacagccccggtccgatcagcgccaccggcatgcagtttgcggtcgacggctat
gtgatcgaaggcgacgcgatcgaacttgccggagacgggagtgaaagcctgatccgcgtc
ggcgacggcagtgccgccggagcgggctataccgccacgatcgcctccaacctcaccggc
gccggatctctggttaagactgacctcggcacgcttatccttgagggtgacaacacctat
cagggtggcacggaacttcggaacggtaccctgtcggtatcgtcggataccaatctcggg
gcggcgtcgggtgacatcacctttgctggcgggatgcttgccagcaccgcgagtttcgac
agcgcgcgcgccgtagttctcggttcaaatggtctcttcgatgtcgccgacgccacgaca
ctcggcctttccggaacgatctccggcgccggcgatctggtcaagcgtggcacaggcacc
ctggagctatccggtgacaacgcctatggcaatacgctggtcgaggccggcacgctgatc
ggcgatgcgggcacgatcagcggcaatattggtaatgccggcacggtggtgttcgatcag
gctgccgatacatcctttgccggcgatatcgtcgggctcggcggctcgaccgggacgatg
atcaagcgtgacgctggcacgctgacgctcgccggcagctcaaggctcgactggacggtc
gatgcaggtggcctggtttcggccaccaatcgctttgttggcgaccttgcgatcggtgcc
gatggcggctttaccttcgaccaggcctatgccggcagttatgcaggcacgatcagcggc
gcgggtgcgctcctgctgatcggcggcggcgcggtcacgctcaccagcgacagttcggga
tttgtcggaacaactgcgctttccgatatgacccttgtggtcaatgatgcacttggcggc
tccctctccatcctcgatggaggtcgcctggagggcatcggcacagtcggcacaacaacg
gttgcttccggcggcacgcttgcccccggaaactcgatcggcacgctcaccgtcaatggc
gatctcagcttcgcggtcggatcgcgctacgaggtcgaagcaaatcccgaaggtacggac
agcgatcttttgcatgcgaccgggaatgtcactctcgatgggggtgctgttgcgcatatc
ggcgcgaccggggaatacgaactgcgttcgacctacacgatcctctcggccgatggctcc
ctgtcgggcgcgttcgacgatgtgacgtcggactttgccttcttgaccccggacctcctc
tatgaccatggcgcgggcaccgtcgtcctggagcttgttcgtaacgatcgcaacttcgct
tctttggccctgacgtccaaccagatcgccactgcacaagggatcgaaagcatcgctttt
gatgctggtcatgcggtttatgatgcgatcgcccagctcgccgacgatgaccacctcatc
cgggccagcttcgatgcgctctcgggcgagatccatgcctcggcgataacagcgctgatc
gaggacagccggtttatccgcaacgccgccaatgaccggattcgtgcagcgttcggcgac
actggcgcaaccgtcacgccggtcctggcttatggcccgggtggggcgcccacgctggtt
gccgccgatcacgtcggaccggtattctggagccacggctttggctcgtggggctcgacc
gatggtgacggcaatgcagcttcgcttgaccgctcgacaggcggtctgcttgttggtgcg
gacacagccctcggtgattggcgggtgggcctgctggccggctacagccagtcgagcttt
gacgcgcaggatcgagcttcatcgggctcaagcaccaattaccatcttggcctgtatggt
ggaaccgagtggggtgatctggccttgcgcactggtgccgcttacacttggcacgacatc
gagacgaaacgcatggtcgcgattcgcggtctcgccgacgcccttaccggtgattatagc
gccgcgactttccaggtgttcggggaactggcctatggcctggagctagattccgggtcg
cggctggagcccttcgctaacctcgcccatgcgagcctgcatcgcgacggttttgcggaa
cggggcggtgcggcggcactgagcggggtgagcgaaaccaccggtatgaccttcacaacg
cttgggctaaggggcgaacacaatctcacgctcggcactatggatgcgacccttaatggt
acagttggctggcggcacgcctttggcgataccacgccggaaagcacccatgccttctcg
gccggcgacgcttttaccatcgccggcgcgccgatgtcgaaagacactgccattatcgaa
gccggccttgaccttaatctgacacccgacgcagccttcggcctttcttatacgggccaa
ctttcctcagacgccgccgatcacggcttcaaggcaaacctgaatgtgaggttctag
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