Sinorhizobium meliloti Rm41: BN406_04002
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Entry
BN406_04002 CDS
T02332
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN406_04002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_04002
Transporters [BR:
smi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BN406_04002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
CCM70284
LinkDB
All DBs
Position
pSYMA:490305..491327
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AA seq
340 aa
AA seq
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MYIRHLIAGAAISVSWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVG
ASPDHLIKARLGQVDVVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAVHSPYTVFA
NVGDYVLAYNKDTVTTVPATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAEKNGGSIDN
VEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKELLSKGVTNVSFV
RPEEGTFPLITSVNIHKDAKNSAMAAAFVNYILSSEVQVAFATRNLYAPTVKNAEIPDDF
EFRDLLVLNDAFGRLYLPDQEKITANKAGWQQQLNQKATR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatattcgacatctcattgccggtgctgcgatttcagtgtcctgggcgggaatggca
gtcgcggaagattgcgcgttaagggttacgacctggggcggcagctatcaggccacctat
caagccgtggcgcaaaaattcgaagaggagcacaattgccgcatcgaatgggtggtgggt
gcgagccccgatcacctcatcaaggcacggttgggccaggtcgacgtcgtcaccaatacg
ctactgaattccatagcgggcgagaaggaagggctttggcagaagctcgatcctgcaaag
atcccgaacatggcaaatctttatccaaatgcggtccactcgccctacaccgtctttgca
aacgtcggcgactacgtactggcctacaacaaggacacggtcaccaccgtcccggcgacc
tgggacgagctttggaaacccgaatacaagaaccgcgtcgtcatctacgggatcgaccat
atcccaaccctcagtctcaccgttctgcaggcggagaagaacggcggcagtatcgacaat
gtcgagcccgggctcgaccgcatggccgagttgatcaagagcggcaatctaatcggctcg
ctggatgtcgaaagccagatggtttcgctcttcgaaacgggggatgcctggcttggaatg
ctcgcaaccggacggatgaaggaactgctgtcgaaaggcgtgacgaatgtgagcttcgta
cgcccggaagaaggcactttcccgctgatcacaagcgtaaacatccacaaggatgcaaag
aattcggcgatggcggcggccttcgtaaactacattctcagttcggaggtccaggttgct
ttcgcgacacggaatctctacgcgccgacggtaaagaatgccgaaatacccgatgatttt
gagttccgggatctgcttgtgctgaacgatgcattcggccgtctctacctgccggatcag
gagaagatcactgccaacaaagcgggctggcagcagcagctgaaccagaaggctacgcgc
taa
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