Sinorhizobium meliloti Rm41: BN406_04089
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Entry
BN406_04089 CDS
T02332
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
smi
Sinorhizobium meliloti Rm41
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_04089
Transporters [BR:
smi02000
]
Other transporters
Pores ion channels [TC:
1
]
BN406_04089
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
HMA_PCA1
Motif
Other DBs
NCBI-ProteinID:
CCM70371
LinkDB
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Position
pSYMA:complement(575187..577271)
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AA seq
694 aa
AA seq
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MNSVQPIRIGFLLLAVAPILFWMLLGVSWAQQAPVGVPPEKAQQFLDLLSDPQVKTWLEG
KIPSAAAEPPAGSPVETISSWEAAVRDRINGLMGAVPRIPEELARGAAVVSRDVNSGRPG
LVVSIFAVLIAVGLGAEWLIRRVFARARKSGANENAGQEILSEIAALLTFALASVGSFLA
FEWPPLLRKIILTLLLAVIVFRVVRAIGKLLFALSGASGIADQPPSAFESDAARRFWLSR
ISIIAGFLLFGWAIVSLMPALSFSNEVTRLAAFLFGLGILVTAVEVVWRRPDKPAPLVVK
SLLTLYLVVLWSAWVAGLLGLLWLGIYSLLLPPLVRGVGDVAQALATRAQRTGPPGIVLS
VVIVRGARAAVIAAAVAWLAYIWRIRAAALAGSEPGAIVIPGLLNGIIALLVADLLWQMS
KALIAYRMGLGPKDGSNVDELARSGRLRTLLPIFRNVLAVFIGAVTVLTILSGLGVQIAP
LIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFRVGEYIQSGSYKGTVESFSLRSVRL
RHHRGPIFTVPFGELGAVQNMSRDWVIDKMTLNVTYDADVDLARKLIKKVGQELAADPEF
AADTIEPLKMQGVDSFGDFAIVLRMKLMTKPGAQFTIKRRAFMMIKKAFDENGIKIAVPT
VHVSGGSDNAAAAQQALNMSKAAELAANKAPVGL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtacaacccattcgaattggttttctgctgctggccgtcgctccaatcctc
ttttggatgctgcttggagtttcctgggcacagcaggctcccgtcggcgtgccgcccgaa
aaggcacaacagttcctcgatctgctctctgatccgcaggtgaagacatggctcgagggt
aagatcccttcggctgccgcggagccgcctgccgggtcgcctgtcgagaccatatctagc
tgggaggccgccgtccgcgatcgcatcaacgggcttatgggcgcagttccccgcatacca
gaggagctggcaaggggcgccgctgttgtctcgcgcgacgtgaactcgggcaggcccggg
ctggtggtcagcatatttgccgttctgattgccgttggcctcggcgccgagtggctgatc
cggagggtcttcgcccgggcacgcaaatccggggcaaacgagaacgccggacaagagatc
ctgtccgagatcgctgccttgctgacgtttgccttggccagcgtcggttcattcctggct
ttcgaatggccgcccttactgcgtaagatcatccttacgctgcttctagccgtgatcgtg
tttcgggtcgtccgagcgatcggcaagttgctgtttgccttgagcggcgccagcggcatt
gccgatcagccgccgtcagcttttgaaagcgatgcggcccgtcgtttctggctttcgcgg
atcagcattattgccgggtttcttctattcggctgggccatcgtcagtctcatgcccgct
ttgagcttctccaatgaggtgacccggcttgctgcctttctgttcgggttgggcattctg
gtaaccgcagtcgaggtcgtctggcggcgccccgacaagccggctccgcttgtcgtcaag
tcactgcttaccctctatctagtcgtgctttggtcggcttgggtagcgggattgctagga
ctgctgtggctgggcatctattcgctgctcttaccgcctctggtgcgcggcgttggcgac
gtggcgcaggccttagcgaccagagcacagcgcaccggccctcccggcatcgtactgagc
gtggtcatagtcaggggtgccagggcagcggtgatcgccgccgcggtcgcatggctcgcc
tacatctggcgcatcagagctgcagccctcgccggcagcgaacccggcgcgatcgtgata
ccgggattgctcaacggtatcatcgccctcttggtcgccgacctgctttggcagatgtca
aaggcgttaatcgcttatcggatgggacttgggccgaaggacggttccaacgtcgatgaa
ctcgcccgcagcggccggttacggacgctcttgccgatattccgcaacgtgctcgctgtc
ttcatcggcgccgttaccgtgctgacgatcctgtccggactgggcgtgcagattgcaccg
ttgatcgccggggcgggtattttcggcgtcgccatcggattcggatcgcagacgctggtc
aaggacgtcctgagcggcgttttctacatgctcgacgatgccttccgtgtcggtgagtac
atccagagcggcagctacaagggcacggtcgaatcgttcagcctgcggtcggtcaggctg
cggcatcaccgcggcccgatcttcacagtgccgttcggcgagctgggggccgttcagaac
atgagccgcgactgggtgatcgacaagatgactctcaacgtcacttacgatgccgacgta
gacctcgcacggaagctcatcaagaaggtcggccaggagctggctgcggatccggagttc
gcggccgacacgattgagcccttgaagatgcagggcgtcgacagcttcggcgactttgcg
atcgtgctcaggatgaagctgatgaccaaaccgggcgcgcagttcactataaagcgacga
gccttcatgatgatcaagaaggcattcgatgagaacggcatcaagatcgcggttccaacc
gttcatgtctcgggaggaagcgacaacgccgccgccgcgcagcaagcgctcaacatgagc
aaggccgccgaactggcggcgaacaaggcacctgtaggcctttaa
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