Sinorhizobium meliloti Rm41: BN406_04224
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Entry
BN406_04224 CDS
T02332
Symbol
gabD3
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00250
Alanine, aspartate and glutamate metabolism
smi00310
Lysine degradation
smi00350
Tyrosine metabolism
smi00650
Butanoate metabolism
smi00760
Nicotinate and nicotinamide metabolism
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN406_04224 (gabD3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN406_04224 (gabD3)
00310 Lysine degradation
BN406_04224 (gabD3)
00350 Tyrosine metabolism
BN406_04224 (gabD3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN406_04224 (gabD3)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN406_04224 (gabD3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN406_04224 (gabD3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN406_04224 (gabD3)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
CCM70506
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Position
pSYMA:717502..718974
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AA seq
490 aa
AA seq
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MTISETLLVKLKDPSLAVDKGLIGAEWLDRSDSGKTFDVSNPATGEVIAILPDMSRSETA
RAIDAAHAAQRAWAEKTGKERAAVLRNLYDLVVANADDLATILTMEMGKPLTEAKGEILY
GASYVEWFGEEAKRVYGDTIPGHQPDKRIIVLKQPIGVVAAITPWNFPNAMLARKLAPAA
AAGCAVVSKPAAETPLSALALALLAERAGLPAGVFNVILSTDSAEVGKEMCANDKVRKLT
FTGSTNVGKILMRQGADQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVAKYRNNGQTCV
CANRIFVQAGIYDAFAARLTAKVSEMTIGDGFEPDVDAGPLISEKALAKVEEHIRDAVTK
GADLVLGGNARGGLFFEPTVLTGATMDMKIAGEETFGPVAPLFKFETENEVVSMANKTEF
GLASYFYSKDVSKVFRVAEALEYGMVGINTGLISTEVAPFGGVKQSGQGREGSKYGIDDY
VETKYLCLSI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcggaaacacttctcgtcaaactgaaggatcccagcctcgctgtcgacaag
ggtttgatcggcgccgaatggcttgacagaagcgacagcggcaagacgttcgatgtcagc
aatccggcgaccggcgaggtcatcgccatcttgcccgacatgagtcggtccgaaaccgca
cgtgcgatcgatgcggcccacgcggcgcaaagggcatgggcggagaagacgggcaaggaa
cgcgccgcggtgctgcgcaacctctacgacctcgtggttgccaatgccgacgacctcgcc
accatcctgacgatggaaatgggtaagccgcttacggaggcgaagggcgagattctctac
ggcgcgtcttacgtcgagtggtttggcgaggaggcgaagcgcgtctacggcgacacgatt
ccgggccaccagccggacaagcgcatcatcgtcctcaaacagccgatcggggtcgtggcg
gcgatcacgccgtggaattttccgaatgcgatgctcgcccgaaaactggcgcctgccgct
gccgcaggctgcgcagtggtttcgaagcctgccgcggagacgccgctgtcggcgctggcg
ctagccttgctcgcagaacgcgccggcctgcctgccggagtcttcaacgttatcctgtcg
accgattccgcggaagttggcaaggaaatgtgtgccaatgacaaggttcgcaagctgacc
ttcaccggctccaccaacgtcggcaaaatactgatgcgccagggcgccgaccagatcatg
aagctgggtctggaactcggaggcaacgcgccgttcatcgtctttgacgacgccgatctc
gacgccgctgtcgaaggcgccatggtcgccaagtaccgcaacaacgggcagacctgcgtc
tgcgccaataggattttcgtgcaggccggaatttacgacgcctttgccgcgaggctgact
gccaaggttagcgagatgacgatcggcgacgggtttgagccggacgtcgacgctggcccg
ctgatctccgaaaaggctctcgccaaggtcgaggaacatatccgggacgcggtgacgaag
ggtgccgatctggttctgggcggcaatgcgcggggcggattgtttttcgagccgaccgtc
ctgaccggagccaccatggacatgaagattgctggcgaggagacgttcggccccgtcgcg
ccgctcttcaagttcgagaccgagaatgaagttgtcagtatggccaacaagaccgagttc
ggcttagcatcctatttttactccaaggatgtgagtaaggtattccgcgtggcggaagcg
ctagaatacggcatggtgggcatcaatacaggcctgatctctacggaagtagcgcccttc
ggcggtgtcaagcagtcggggcaaggccgcgaaggctccaaatacggcatcgatgactat
gtggaaaccaagtatctttgcctcagtatctga
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