Sinorhizobium meliloti Rm41: BN406_04580
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Entry
BN406_04580 CDS
T02332
Name
(GenBank) Diguanylate cyclase/phosphodiesterase
Organism
smi
Sinorhizobium meliloti Rm41
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
EAL
PAS_3
PAS
PAS_9
GGDEF
PAS_8
PAS_7
PAS_11
Diguanyl_cycl_sensor
PAS_10
Filamin
Motif
Other DBs
NCBI-ProteinID:
CCM70862
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Position
pSYMA:1062408..1065623
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AA seq
1071 aa
AA seq
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MNAPTPEPPSHRSHDLFQRLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTD
HDILPGEQADRIVSLDRIVLSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKF
VVVTIVDITNLRRTEETLRASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGE
KETLGSGWAKAVHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAAKRDA
DGKIVRWYGVLEDIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLE
TTGQTEAEALGFGWVDVIHPDDRQAVQETFFRATAGKEPVRSEYRLRRADGSWAWVIDVG
QPRFSADGTFLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLM
NEAGRRIFGLNEGAPVTGQTWDSIGRASDADKVEAAWESVRRGKTARFEISVRDAGGEER
CMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDS
VMLFDADWRVRYLNENARKLLQVGDEALGRVFWKLFPEEEEGSFAKHCREVMDRRVRSFF
EDHLSSLGRWVEANASPTQDGISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLAN
RMFFRECFEEALNESNHARMAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQSVRTT
ETVARLGGDEFAIIQPLTESRDEAFRLAQRLIDTLSEPFSIEGAAATVGTSIGIAFAPED
GTSADELIKAADIALYSAKSSGRGTYKLFDVAMHAQLQTHQQMKITMRDALARGEFELHY
QPLVSLESRCVSCCEALLRWRHPDRGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAAR
WPERVSVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQ
DLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQ
SLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAAEISKLIAAGSL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccgacgcccgaaccgccctcccatagatcccatgatctcttccagcggctt
atggatggcatcgccgaaccggtgattatcaaggacgatgcgtcacggttcgtcttcatc
aacgacgcggcatgcgaccttctggggaaagaccggaaccagctcattggacggaccgac
cacgacatattaccgggggagcaggccgacaggatcgtctcgctcgacaggatcgtactt
tcgacaagcgaaggccacgagctcgaagagcaaatcacgacgcccgatgggacacagcgc
acgctcctgacgaaaaaacggtgcgtgagcattcccgccggttcgacacaagagaagttc
gtggtcgtaacgatcgtggatatcaccaacctgcgcaggaccgaagagaccctccgagcg
agcgaagagcattatcgctctctggtcgaccttcacccgcaagttccctggaccgcagac
acggcgggagaggtcctggaggttggcccgcgatggagcgaactgaccggactgggcgaa
aaagagacactcggcagcggatgggccaaagcggttcatccgcaggacgcgggggcattg
caagaggaatggcgccggtccctggcaagcggtgcaccgttcgactgcgaatacaggctc
ttgaccaagaccggcgattatcgatggttccgcgctcgcgcagccgcaaagcgtgacgcg
gatggaaaaatcgtgcgctggtacggcgttttggaggatatcgacgaaaggcggcgcgct
gccgacgacttgcgcgaaagcgaggcccgctttcgagccatcgctgacgacgcccccgtc
atgatctgggtagcggaccccacaggcgacacaagcttctttaatcgcttgtggttggaa
acgactgggcaaacagaggctgaggcgctcggtttcggttgggtcgacgtcatccatccc
gatgaccgccaggcagtccaggagacattctttagggcgactgcgggcaaggaaccggtg
cgcagcgagtaccggttgcgacgagccgacggaagctgggcatgggtcatcgacgtcggg
caaccgcgcttctccgccgacggaaccttcctcggttatgttggatccgttctcgacatc
acggaacgccgagccgcggagatcgctcaacaggaagctcaggcgtttatcagaagcatc
tttgacagcagccccgactgtgtgcgcgtgctcgacatggagggacggcccctgctcatg
aacgaggccgggcggcgtatcttcggactgaacgaaggcgcgccggtgacggggcagaca
tgggactccatcgggcgagcttccgacgctgacaaggtcgaggcggcctgggaaagcgtc
agacgcggcaagacagcgcgtttcgagatttccgttcgggatgctggcggtgaagagaga
tgcatggacgtgatctcggccccgatcacagaccatcacggaaagccgttcagaatcctg
tcgatctggcgcgacattaccgatgcgaagcgagcaagcgacgaaatcagccgtgcccaa
aggcacgccgaagccgctgccgaccaactttcctcggttctcgagagcaccatggatagc
gtcatgctgttcgacgcagactggcgcgtgcgctatctcaacgagaatgcccggaagctc
ctgcaggtcggagacgaggccctcggaagagtgttctggaaactcttccccgaagaagag
gaggggagcttcgccaagcattgccgcgaagtgatggaccgacgggtccgctcctttttt
gaggaccatttgtcctcgctcggccgctgggtcgaagcgaacgcctccccaacccaagac
ggcatttccattttctgccgagacataaccgagcggcggcgcgccgaggaggacacgctg
ctcgcccaaaagcagatggcgcatatggccaggcacgacatgctcacgggcctcgcgaac
cggatgttcttccgcgaatgcttcgaggaagcgctgaacgagagcaaccatgcgcgtatg
gcagtgctgtgcctggaccttgacggcttcaaggccgtcaacgacacgctcggccatccg
gccggcgacgctttactgcgccaggtttccacaagactgatccagtcagtcaggaccacg
gaaaccgtcgcgcgacttgggggtgacgaattcgccataatacaacctctgacggagtca
cgtgacgaagctttccgcctcgcacagcgactgatcgataccctttccgagcccttcagt
atcgagggcgccgccgcaaccgtcgggaccagcatcggaattgcctttgcgccagaagac
ggaacctctgcagatgagttgatcaaggcggctgatatcgcactctacagtgcgaaatct
agcggccgcggcacctacaagcttttcgacgtggcgatgcatgcgcagttgcaaacacac
cagcagatgaagatcacaatgcgggacgcgctggcgaggggagagttcgagctgcactat
cagccgctggtgagcttggagtcgcgttgcgtgagctgctgcgaggcgttgttgcgatgg
cggcaccccgaccgtggaatgatcgccccgtccgaattcattccaattgccgaagaaacc
ggcttgatcgttccgattggcgagtggatcctgggcgaggcatgccgccaggccgcgcgc
tggccggaacgtgtgagtgttgccgtaaacctctcccctgtccagttcaagcatcgcaac
ctggtgagggccgtcgccaaggccctttcagccacccggcttgatcccgctcgtctgcaa
ctggagatcacggaaacggttctcctggacgagagtgagcataatctcgagctgctacag
gacttgcgaaggctcggcgtcaagatcgcgatggacgatttcggaacgggttattcctca
cttgggtacttgcgcagctttccgttcgacaagatcaaggttgaccaggcctttgtccgg
gacctgccgcacggcaaggagtccctcgcgatcgtcaaggccgtcgcgggccttgggcaa
agccttggcatgacgacctcggtcgagggcgtcgaaacggaggatcagctggcggtggtg
gattcggagggcttcaatgaggtgcagggctacctcttttctcgccccctgcccgccgcg
gaaatttccaagctgatcgcggccggttccctctaa
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