Sinorhizobium meliloti Rm41: BN406_04759
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Entry
BN406_04759 CDS
T02332
Symbol
gabD5
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00250
Alanine, aspartate and glutamate metabolism
smi00310
Lysine degradation
smi00350
Tyrosine metabolism
smi00650
Butanoate metabolism
smi00760
Nicotinate and nicotinamide metabolism
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN406_04759 (gabD5)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN406_04759 (gabD5)
00310 Lysine degradation
BN406_04759 (gabD5)
00350 Tyrosine metabolism
BN406_04759 (gabD5)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN406_04759 (gabD5)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN406_04759 (gabD5)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN406_04759 (gabD5)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN406_04759 (gabD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CCM71041
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All DBs
Position
pSYMA:1250008..1251462
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AA seq
484 aa
AA seq
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MRLKDKELFRQLGLIGGEWIAGASGEVVDVIDPANQAVLGTVPDMGTAETRAAIEAANAA
FGPWKKKTHAERAAVLERWHALMIENLEDLAVLVTMEQGKPLEEARGEIRYGAAFVKWFA
EESRRIGGHTIPSPTSDRRIVVLKEAVGVCAIVTPWNFPNAMITRKVAPALAAGCTVVIK
PSEFTPFSALALGVLAERAGIPAGVVNIVTGMPTAIGNEFMTNETVRKISFTGSTRVGSL
LMRGAADSVKRLSLELGGNAPFIVFDDANLDLAVEGAIASKFRNGGQTCVCANRILVQAG
VYDAFAEKLGARVNAMKVGPGTEPGIAIGPMINEAAIDKIDRHVEDAIAKGAKLAARGRS
VPGGRQYTAPIVLTGATTDMLLASEETFGPVAPLFRFETEDEAIAIANGTPFGLAAYFYT
EGLKRSWRVAEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEMKSFHI
GGLD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaaggacaaggaactcttccggcaattgggcctgatcggcggtgagtggatc
gccggagcttcgggcgaggtcgtcgacgtcatcgatcctgcgaaccaggccgttctcggc
accgtgcccgacatgggaacggccgaaacccgcgcggccatcgaagcggccaatgccgcc
ttcggaccttggaagaagaaaacccacgccgaacgcgccgccgtgctcgagcgctggcac
gcgctgatgatcgaaaacctcgaagatctggcggtgctcgtgacgatggaacagggcaag
ccgctcgaggaggcgcgtggcgagatccgctacggcgccgcctttgtcaaatggttcgcg
gaagaatcccgccgcatcggcggccacaccattccctccccgacgtcggaccgccgcatc
gtcgtgctgaaggaagcggtcggcgtctgcgccatcgtcacgccgtggaatttccccaac
gcgatgatcacccggaaggtcgccccggcgctcgccgccggctgcacggtggtcatcaag
ccctcggagttcacgcccttctcggcgctcgccctcggcgtgctcgccgagcgcgccggc
attccggccggcgtcgtcaatatcgtcacgggcatgccgacggcgatcggtaacgagttc
atgacgaacgagacggtacgcaagatctccttcaccggctcgacccgcgtcggttcgctg
ctgatgcgcggcgctgcagacagcgtcaagcggctctcgctcgaactcggcggcaatgcc
cccttcatcgttttcgacgacgccaatctcgatcttgcggtggaaggcgcgatcgcgtcg
aagttccgcaatggcgggcagacctgcgtctgcgccaaccgaattctcgtgcaggccggc
gtctatgacgccttcgccgagaagctcggcgcccgcgtcaacgcgatgaaggtaggcccg
gggacggagcccggcatcgcaattggcccgatgatcaatgaggctgcgatcgacaagatc
gaccgccacgtcgaagacgcgattgccaagggcgcaaagctggcggcgcgtggcaggtcg
gtgccggggggccggcaatatacggccccgattgtgctcaccggcgccaccacggacatg
ctgctcgccagcgaggaaaccttcggtcccgttgccccgctcttccgcttcgagaccgaa
gacgaggcgatcgccatcgccaacggcacgccctttgggctggccgcttatttctacacc
gaaggcctgaagcgctcctggcgggtggcggaagcactggagtttggcatgatcggcctt
aacaccggcgccatctcgaccgaagtcgcgcccttcggcggcgtcaagcaatccggcctc
ggacgcgagggcgcccaggtcggcatcgaagaatatctcgagatgaagagcttccacatc
ggggggctggactag
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