Sinorhizobium meliloti Rm41: BN406_05019
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Entry
BN406_05019 CDS
T02332
Symbol
groL3
Name
(GenBank) 60 kDa chaperonin 3
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN406_05019 (groL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smi03019
]
BN406_05019 (groL3)
03110 Chaperones and folding catalysts [BR:
smi03110
]
BN406_05019 (groL3)
03029 Mitochondrial biogenesis [BR:
smi03029
]
BN406_05019 (groL3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smi04147
]
BN406_05019 (groL3)
Enzymes [BR:
smi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN406_05019 (groL3)
Messenger RNA biogenesis [BR:
smi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN406_05019 (groL3)
Chaperones and folding catalysts [BR:
smi03110
]
Heat shock proteins
HSP60 / Chaperonin
BN406_05019 (groL3)
Mitochondrial biogenesis [BR:
smi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN406_05019 (groL3)
Exosome [BR:
smi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN406_05019 (groL3)
Exosomal proteins of other body fluids (saliva and urine)
BN406_05019 (groL3)
Exosomal proteins of breast cancer cells
BN406_05019 (groL3)
Exosomal proteins of colorectal cancer cells
BN406_05019 (groL3)
Exosomal proteins of bladder cancer cells
BN406_05019 (groL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCM71301
LinkDB
All DBs
Position
pSYMA:1493020..1494654
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKQIVFSTDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKSYGAPRITKDGVSVAKEI
ELEDKFENMGAQMVRAVASKTNDLAGDGTTTATVLAASIFREGAKLVSVGMNPMDLKRGI
DLGVAAVLAEIKARATKVISSSEIAQVGTIAANGDAGVGEMIARAMEKVGNEGVITVEEA
RTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILIHEKKLGSLQAMLPILEAA
VQSGKPLLIISEDVEGEVLATLVVNRLRGGLKIAAVKTPGFGDRRKAMLEDIAVLTAGQM
ISEDLGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQARVSQIKAQIEETASDY
DKEKLQERLAKLAGGVAVIRVGGATELEVKEKKDRIDDALNATRAAVEEGIVPGGGVALL
RAKSALVGLNDDNADVTAGISIVRRALEAPIRQIADNAGVEGSIVVGKLVDGRDHNQGFD
AQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLITAEAMIADIPERGSPQSTGNGAVD
SMGY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaaacaaatagtcttctccactgacgcccgcgatcgcctgcttcgcggcgtg
gaattgctcaacaatgccgtcaaggtgacactcggcccaaagggccgcaatgtcgttatc
gacaagtcctatggcgctccacgcattaccaaagacggcgtctctgtcgccaaggaaatc
gaacttgaagacaagttcgaaaatatgggtgcgcagatggtgcgcgcggtagcctcgaag
accaatgaccttgccggcgacggcaccacgacggcgaccgtgctcgccgcgtccatcttt
cgcgaaggcgccaagctggtttcggtgggcatgaacccaatggacctaaagcgcggcatc
gatcttggggttgccgctgtcctcgcggaaatcaaggcgcgcgcgacgaaggtcatctcg
tcgagcgagatcgctcaggtcggcacgatcgccgccaatggcgacgccggcgtcggcgag
atgatcgcaagggcgatggagaaggttggcaacgagggtgtcattaccgtcgaagaggcc
aggacggccgataccgaactcgacgtcgtcgagggcatgcagttcgaccgcggttatctc
tcgccgtatttcgtgaccaatgccgagaagatgcgcgtggaactggaggatccctacatc
ctcattcacgagaagaagctcggcagcctgcaggctatgctgcctatcctggaggccgcg
gtgcagagcgggaaaccgttgctgatcatctccgaagacgtcgaaggcgaagtgctggcg
acgctcgtcgtcaacaggctgcgaggtggcctgaagatcgcggcagtcaagacgccaggt
ttcggcgaccgccgcaaggccatgctggaagacattgccgttttgacggccggccagatg
atctccgaggatctcggcatcaagcttgagaatgtcacgctcgatatgcttggccgcgcc
aggcgggtgctgatcgagaaagacacgaccacaatcatcgacggctccggcgacaaagcc
tccattcaggcgcgcgtcagccaaatcaaggcgcagatcgaggagacggcgtccgactac
gacaaggaaaagctgcaggagcggttggcgaaactcgccggcggcgtcgcggtcatccgc
gtcggcggcgcgaccgagcttgaagtgaaggaaaagaaggaccgcatcgacgatgccctg
aacgctacgcgcgcggcggtcgaagaaggcatcgttcccggcggcggggtggcgctgctc
cgagcaaaatcggcccttgtcggtctcaacgacgataacgccgacgtaacggcaggcatc
tcgatcgtgcgccgagccctggaagcaccaatccgccagatcgccgacaatgccggtgtg
gaaggttcgatcgttgtcggaaagcttgtcgacggcagggatcacaaccaagggttcgac
gcacagacggaaacctatgtcgatatgatcaaggccggcatcgtcgatcccgccaaggtc
gtacggacagcattgcgggacgctggctcgatcgcgtcacttctgatcaccgccgaagcc
atgatcgccgatattcccgagagagggtctccccaaagcaccggaaacggcgccgtggat
agtatgggatactga
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