Sinorhizobium meliloti Rm41: BN406_05416
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Entry
BN406_05416 CDS
T02332
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN406_05416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smi03400
]
BN406_05416
Enzymes [BR:
smi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BN406_05416
DNA repair and recombination proteins [BR:
smi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN406_05416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCM71698
LinkDB
All DBs
Position
pSYMB:complement(356412..357053)
Genome browser
AA seq
213 aa
AA seq
DB search
MPKQLAKLGPALAGEHAEATTIASLRRQAEGCERCDLYKNATQLVFGEGPVDARVVFVGE
QPGDREDLAGRPFVGPAGRILDECLHEAGIDRSECYLTNAVKHFKFEQRGKRRMHSRPNA
GEIQACAWWLGAELDELRPEIVVALGATALMSLLGRSVGVTRNRGQLLTAPGGFSVLVTI
HPSYLLRIRGRSDPEAERARFVDDLAKVATRIG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacagcttgcgaaacttggcccggcccttgccggcgaacacgccgaggcaacg
acgattgcctctctgcggcggcaggcggaggggtgcgagcgctgcgacctctacaagaac
gccacgcaactggtcttcggcgagggtccggtcgacgcccgtgtcgtgttcgtcggcgaa
cagcccggcgaccgcgaggaccttgccgggcgcccgttcgtcggacccgccgggcgcatc
ctggacgagtgcctgcacgaagccggcatcgaccggtcggaatgctatctcaccaatgcc
gtcaaacacttcaaattcgaacagcgcggcaagcgccgaatgcattcgcggccgaacgcc
ggtgagattcaggcctgcgcctggtggctcggcgccgaactcgatgagctccgccccgaa
atcgtcgtcgcgctcggggcaacggcgctgatgtccctgctcgggcgaagcgtgggtgtc
accaggaaccgcggccagcttctgacggcccccgggggcttctccgtgctcgtgaccatc
cacccctcctatcttctgagaatccgaggccgatctgaccccgaagcggaacgcgcccgg
tttgtcgacgatctcgctaaggtggcgactcgcatcggttga
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integrated database retrieval system
