Sinorhizobium meliloti Rm41: BN406_05419
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Entry
BN406_05419 CDS
T02332
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smi
Sinorhizobium meliloti Rm41
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smi03032
]
BN406_05419
03400 DNA repair and recombination proteins [BR:
smi03400
]
BN406_05419
Enzymes [BR:
smi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN406_05419
DNA replication proteins [BR:
smi03032
]
Prokaryotic type
DNA Topoisomerases
BN406_05419
DNA repair and recombination proteins [BR:
smi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN406_05419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCM71701
LinkDB
All DBs
Position
pSYMB:361177..362319
Genome browser
AA seq
380 aa
AA seq
DB search
MARATSVDVLECPPCVIADGPRNLAAAGLVPEETGLVYVSDSEPGIRRQRRGKGFVYRMP
DGSIVTDPLIKSRIAALGLPPAYDNVWICLEERGHLQATGYDARGRKQYRYHSEWQALRS
ADKFAQLVEFGKALPKIRRTVRRHMQGDVENMQTVLAALVALLDEAHLRTGNQAYVQANG
SYGATTLLKRHLRLGDGFIELKFIGKGGKRVQRLLRRPKLQQLLEEIADLPGRQLFVWKD
ENDALRPVDSGRLNRYLTDMAGAAISAKTFRTWGGTLAAFTVARTSIEQGEWPTIKQMSE
AAASVLHNTPAISRSSYIHPDVLALADKSASISARQLQARGRLDSELRVEEQRLLSFLQR
SARSRTRQAKSVAEERRASS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcaacgtcggtcgacgtgctcgaatgtccgccttgcgtgatcgcggatggt
ccgcggaacctggcggcggccggtctcgtgcctgaggaaaccgggctcgtctatgtgagc
gacagcgaaccgggcatccggcggcaaaggcgtggcaaggggtttgtctaccgaatgccg
gacggctcgatcgttaccgatccgttgatcaaaagccgcatagcggcgctgggcctgccg
cctgcttatgacaacgtctggatctgcctcgaagaacgggggcatctgcaggccacgggc
tacgatgcgcgcggacgaaaacagtaccgctatcacagcgagtggcaggctctcaggagc
gccgacaaattcgcgcaactggtggaattcggcaaggcattgcccaagatacgccgcacc
gtacggcgccacatgcagggcgacgtggaaaacatgcaaaccgtgctcgctgcgctcgtg
gccttgctggacgaggcccatctgcgcaccggcaaccaggcttacgtgcaggccaatggg
agctatggtgccacgacgctgctgaagcggcatctcaggctgggcgatggcttcatagag
ctgaaatttatcggcaagggcggcaagcgcgtccagcgcctgctccgtcgccccaaattg
cagcagttgctcgaagagatcgcggatctgccgggccgacagcttttcgtttggaaggat
gaaaacgacgcccttcgcccggtcgattccggccggctcaaccggtacctcacggacatg
gccggcgcagccatttcggcaaagacattccggacctggggcggcactctcgcggctttc
acagtcgcccggacctcgatcgagcagggtgagtggccgacgatcaagcagatgagcgaa
gcggctgcgtccgttcttcacaacacgcctgccatcagccggagcagctacattcatccg
gatgtgctcgctctcgccgacaagtcggcctcgatctcggcacggcagcttcaggcgcgc
gggcgcttggatagcgaactgcgtgtggaggaacagcgcttactgagttttcttcagcgc
tcggcgcgctcgaggacgcggcaggcaaaatcggtcgcggaagagcgacgagcttccagc
taa
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