Sinorhizobium meliloti Rm41: BN406_05477
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Entry
BN406_05477 CDS
T02332
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN406_05477 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_05477 (xylF)
Transporters [BR:
smi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
BN406_05477 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DHQS
Motif
Other DBs
NCBI-ProteinID:
CCM71759
LinkDB
All DBs
Position
pSYMB:complement(405876..406913)
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AA seq
345 aa
AA seq
DB search
MKSILKLMAGAAIIASMHSAAIAKDLVIGVSWSNFQEERWKTDEAAIKAALEASGDKYIS
ADAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIENPD
AFYITFDNKEVGRLQAREVFKQKPEGNFVFIKGSSADPNADFLFSGQLEVLKEAIDAGKI
KNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALDAQGLAGSVPV
SGQDADKAALNRVALGTQTVSVWKDSRELGKKAAEIAVALAGGKTKDEVEGVQTFNGGPK
GVAMKSVFLAPLAITKDNLNVVIDAGWISKEEACQGAKSDVAACK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccattttgaagctgatggcgggggctgccatcatagcgtccatgcattccgcg
gcgatcgccaaggatctggtcatcggcgtttcctggtccaatttccaggaagagcgctgg
aagaccgacgaggccgccatcaaggccgcgctcgaagcttcgggcgataagtatatctcg
gccgacgcgcagtcttccgccgccaagcagctcaccgacatcgagtcgctgatcgcccag
ggcgccaacgcgctcatcgtgcttgcgcaggactccgacgcaatcggcccggcgatcgag
aaggcagccgccgaggggattccggtcgtcggctatgatcgcctcatcgaaaatcccgac
gccttttacatcacgttcgacaacaaggaagtcggccgccttcaggcgcgcgaggtattc
aagcagaagccggaaggcaacttcgttttcatcaagggctcctccgccgatccgaacgcc
gatttcctcttctccgggcagctggaagtcctgaaggaggcgatcgacgcgggtaagatc
aagaatgtcggcgaagcctataccgatggctggaagccggagaacgcccagaagaacatg
gagcagttcctgaccgccaacgacaataaggtcgatgcggtcgtggcctccaacgacggc
actgccggcggcgcgatcgcggcactcgacgcccagggccttgcgggctcggttccggtt
tccggccaggatgccgacaaggctgcgctgaaccgcgtggcgctcggcacgcagacggtt
tcggtctggaaggactcccgtgagctcggcaagaaggcagccgaaatcgccgtggcgctt
gccggcggcaaaaccaaggacgaagtcgaaggcgtgcagaccttcaacggcgggccgaag
ggcgtcgccatgaagtccgtctttctcgcgccgctggcgatcaccaaggacaatttgaac
gtcgtcatcgacgccggctggatttccaaggaagaagcctgccagggcgccaagagcgac
gttgctgcctgcaaataa
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