Sinorhizobium meliloti Rm41: BN406_05534
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Entry
BN406_05534 CDS
T02332
Symbol
XDH1
Name
(GenBank) Xanthine dehydrogenase/oxidase
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00230
Purine metabolism
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
smi01232
Nucleotide metabolism
Module
smi_M00546
Purine degradation, xanthine => urea
smi_M00958
Adenine ribonucleotide degradation, AMP => Urate
smi_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BN406_05534 (XDH1)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
BN406_05534 (XDH1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
CCM71816
LinkDB
All DBs
Position
pSYMB:complement(469868..472201)
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AA seq
777 aa
AA seq
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MDKSTLEVSTITGPMHAPLRHDSAHKHVAGTADYIDDMPEPAGTLHGALGLTDRAHAEIL
EMDLAAVAAVPGVVCVLTARDMPHSNDISPTHLHDEPVLADGRVEFHGQPAFAVIAETRD
VARRAARLARITYRDFLPAIDVVDAVATGGELVTPPLTLERGDAEGELERAPRRIQGHMR
IGGQEHFYLEGHIALAIPGEDDEMTVWVSTQHPSEVQRMVAQVLGVPSNAITVNVRRMGG
GFGGKETQGNQFAALAAVAARKLRRAVKFRPDRDDDMIATGKRHDFLVNYDVGFDEEGRI
RAVQANYAARCGFSADLSGPVTDRALFHADNAYFYPHVKLTSQPLKTNTVSNTAFRGFGG
PQGMLGGERIIEEIAYALGKDPLEIRKLNFYGDPHSGRNVTPYHQKIEDNIIRRIVDELE
ASADYQARRAAIIEFNRSSRVIRKGIALTPVKFGISFTLTHLNQAGALVHIYTDGSVHLN
HGGTEMGQGVYTKVAQVLADSFQIDIDRVKITATTTGKVPNTSATAASSGSDLNGMAAFD
AARQIKERLVAFAAERWQTTAENVTFVANHVRIGDELVPFAQFVQEAYGARVQLSAAGFY
ATPGIHWDRAAGRGTPFYYFAYGAAVSEVSIDTLTGEYLVDRVDVLHDVGRSLNPAIDLG
QIEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEET
IGRSKAVGEPPLMLPISVVEALSMAVASVAGYRECPRLDTPATPERVLMAVERLRAG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggataaatccaccctcgaagtcagcaccatcaccggaccgatgcacgcaccgctccgt
cacgacagcgcccacaagcatgtggcgggtaccgccgattatatcgatgacatgccggaa
cccgccggcaccctgcatggcgcgctcggcctcacggaccgggcgcatgcggaaatcctg
gagatggacctcgccgccgtcgccgcagtgcccggcgtcgtctgcgtgctcacggcaagg
gacatgccgcattccaacgacatcagccccacccatctgcacgacgagccggtgcttgcc
gacgggcgcgtggagttccatggccagccggccttcgcggtcatcgccgaaacgcgcgac
gtcgcccgccgcgccgcgcggctcgccaggataacctatcgtgacttcctgccggcgatc
gatgtcgtcgatgctgtggcaaccggcggcgagctggtgaccccgccgctgacactcgag
cgcggcgacgccgaaggcgagctcgagcgggcgccccgccgcatccaggggcacatgcga
atcggtggccaggagcacttctatctggaaggccatatcgcgctcgcgattcccggcgag
gatgacgaaatgaccgtctgggtatcgacgcagcatccgagcgaagtccagcgtatggtc
gcgcaggtgctcggcgttccctccaacgccatcacggtgaatgtccgccgcatgggcggc
ggcttcggcggcaaggaaacgcagggcaaccagtttgcggcactcgccgccgtcgccgcg
cgcaagcttcgccgcgccgtcaagttccgcccggaccgggacgacgacatgatcgccacc
ggcaagcggcacgatttcctggtaaattacgatgtcggcttcgacgaggagggacgcatc
cgggcggtccaggcgaattatgccgcgcgatgcggtttctccgccgatctctccggcccg
gtcaccgaccgcgcccttttccatgcggacaatgcctacttctatccgcatgtgaagctc
acctcgcaaccgcttaagaccaatacggtttccaacaccgcctttcgcggcttcggcggg
ccgcagggcatgctcggcggcgagcggatcatcgaggagatcgcttacgcgctcgggaag
gacccgctcgaaatccgcaagctgaacttctatggcgacccgcattccggccgcaacgtc
acgccctatcaccagaagatcgaagacaacatcatccgccggatcgtcgatgagctggaa
gcgagcgccgattatcaggcgcgccgggcggcgattatcgaattcaacagatcgagccgg
gttatccgcaaggggattgcattgacgccggtgaaattcggcatctccttcaccctcaca
catctgaaccaggccggcgccctcgtccacatctacacggacggctcggttcacctcaac
cacggcggcaccgagatgggccagggcgtctatacgaaagtggcgcaggtccttgcagac
agtttccagatcgacatcgaccgggtgaaaataaccgcgacgacgaccggcaaggtgccg
aatacgtctgcgacagccgcctcctccggctccgacctcaacggcatggccgccttcgat
gccgcgcgtcagatcaaggagcggctcgtcgcctttgcggccgagcgttggcagacgacg
gccgaaaacgtcaccttcgtggccaatcatgtccgtatcggcgacgagctcgttcccttt
gcgcagttcgtgcaggaggcctacggtgcacgtgtccagctctccgccgccggcttctat
gcaacgcctggcatccactgggaccgggcggccggccgcggcacgcccttctactacttt
gcctatggcgcggccgtttccgaggtctcgatcgatacgctgacaggcgaatacctggtc
gatcgcgtcgacgtgctgcacgacgtcggccgttccctcaacccggcgatcgatctcggc
cagatcgagggcggcttcgttcagggcatgggctggctcacgacggaagagctctggtgg
gatgagaaggggcgcctgaggacgcatgcgccctcgacctacaagataccccttgcctcg
gatcggccgaagatcttcaacgtgcgcctggccgaatggtcggaaaacgccgaagagacg
atcggcagatcgaaggccgtgggagagccgcccctcatgctgccgatttcggtggtcgag
gccctgtcgatggccgtcgccagcgtcgccggctatcgcgagtgcccccggctcgatacc
ccggcaacgcccgaacgtgtcctgatggcggtggaacggcttagagctggatga
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