Sinorhizobium meliloti Rm41: BN406_05557
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Entry
BN406_05557 CDS
T02332
Symbol
nfeD
Name
(GenBank) membrane protein necessary for nodulation competitiveness
KO
K07403
membrane-bound serine protease (ClpP class)
Organism
smi
Sinorhizobium meliloti Rm41
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
BN406_05557 (nfeD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NfeD_membrane
NfeD1b_N
NfeD
STAS
Motif
Other DBs
NCBI-ProteinID:
CCM71839
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All DBs
Position
pSYMB:494952..496334
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AA seq
460 aa
AA seq
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MARILILLFSLLSAFAFPVTPVPGAERTALVLHVNGAISPAAAEYVTRGLQRARDRGAAL
VVLQMDTPGGLDTSMRDIIRAILDSPVPVASFVSPSGARAASAGTYILYASHIAAMAPGT
NLGAATPIAIGGGLFGNDEQKGEEKPGDQDKPEPRKPANAGEAKLINDAVAYIRGLAELR
NRNVDWAERAVREAASLSSAAAAREQVIDFTAVSIDDLLKQAHGRAVRIGQSDVRLDTFG
LATEDLPPDWRTRLLSVITNPNVALLLMMVGIYGLIFEFLAPGTVVPGTIGGISLLLGLY
ALAVLPVSYAGVGLILLGAGLLVAEAHAPSFGVLGLGGTVALVLGAAILFDTDMPGLQVS
WPALSGIAIASLAFSLLVARLALVSRRHKVATGAEEMIGISGKVDSWAGADGYVIAHGER
WRAVSSESLGPGEDVMVVGREGLTLKVARNAAPGRDGDRS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcctcatcctgttgttcagtctcctgtcggccttcgcatttcctgtcacg
ccggtgcccggagccgagcgcacggcgctcgtcctgcacgtcaacggcgccataagcccc
gccgcggcagaatatgtgacgcgcggccttcagcgggccagggatcggggcgccgcgctg
gtggtcctgcagatggacacgcccggcggactggatacgtcgatgcgcgacatcatacgc
gccatcctcgattctcccgtgccggtcgcgagtttcgtatctcccagcggagcgcgggcg
gcaagcgccggcacctatatcctctatgcgagccacattgcggccatggcgccggggacg
aatctgggcgccgcgacgccgatcgccatcggcggaggactgtttggcaatgacgagcag
aaaggcgaggaaaagcctggcgatcaggacaagccggagcctcgcaaaccggccaatgcc
ggcgaagcgaaactcatcaatgatgcggtcgcctatatccgcggcctcgcggagttgcgc
aaccgcaacgttgactgggcggagcgggccgtgcgcgaggccgcgagcctttcctccgcc
gcagccgcgcgcgagcaggtcatcgacttcaccgccgtcagcatcgacgacctcttgaag
caggcccacggccgcgccgtccgcatcggccaatccgacgtccggctcgatacgttcggg
ctcgccacagaggatctgccgccggactggcggacgcgcctgctgtcggtgatcaccaat
ccgaacgtcgcactcctcctgatgatggtcggaatctacggactcatcttcgagtttctc
gcgcccggcacagtggtgccgggtacaatcggcggcataagcctcctgctcggtctctac
gcgcttgcggtgttgccggtgagctatgccggcgtcggcctcatcctcctcggggcgggg
ctgctggtggcggaggcgcatgcgccgtctttcggcgtgctcggcctcggcggcaccgtt
gccctagtgctgggcgctgccattctcttcgatacggatatgcccggactgcaagtgtcc
tggcctgcactgagcggtattgcgatagccagcctggctttcagtttgctggtcgcccgt
ctcgcccttgtgtcgcgccggcacaaggtcgccaccggcgcggaagagatgatcggcatc
tccggtaaggtcgacagttgggcgggagcggacggctacgtgatcgcgcatggcgagcgg
tggagggccgtcagcagtgaatcgcttggcccgggagaggacgtgatggtcgtcggccgt
gagggcctcacgctcaaggtggcgcgcaacgctgcgcccggaagagatggagaccgctca
tga
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