Sinorhizobium meliloti Rm41: BN406_06011
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Entry
BN406_06011 CDS
T02332
Symbol
lsrA
Name
(GenBank) Autoinducer 2 import ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi02010
ABC transporters
smi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN406_06011 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN406_06011 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smi02000
]
BN406_06011 (lsrA)
Transporters [BR:
smi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
BN406_06011 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCM72293
LinkDB
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Position
pSYMB:1022625..1024127
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AA seq
500 aa
AA seq
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MAGSPVAGRVAKLTDVWKSYGAVPVLKGVSLVLHAGEVHALLGGNGAGKSSLMKIMSGVI
ASNAGAIEINGRALTHASPALAQKLGLYLVPQEVHILPNQSVLENICLGLAASPRALRPR
VEQLVAELSVSLDLDVQAAALEVAERQIVEILRGLVRDARVMILDEPTSALTPFETSALF
QRVRKLQSQGVGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAEIIDAMSRVQ
IADDADKNRVGRKVSQIGKPRLSVHDLSGEGFRDISLDVRAGEILGLAGVVGAGRTEFAE
TLFGLRPQMAGSVVFDGAELKKRSPRICIDLGLVYLPEDRQQHGLFLEAPLSWNVSSYLV
HRLPFFLRPGAERKVFDGFRASMGIKCTGADQEARGLSGGNQQKVLLAKCLSARPKVLIL
DEPTRGVDVAARNDIYDLIRRLAADGVAIILISSDFDEIEQLADRVEIMAFGQSGGKLTD
QISVDAIARLAFGASEGRHA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctgggagcccggtggccgggagggtcgcgaagctgacggacgtctggaagtcctac
ggtgccgttccggtgctgaaaggtgtttccctagttttgcacgcgggagaggtgcatgcg
cttctcggcggcaacggcgctggcaagtcgagcctcatgaaaatcatgtcgggcgtcatt
gcgtctaatgccggcgccatcgagatcaacggccgcgccctcacccatgcatcgccggcg
ctcgcgcagaaactcgggctttacctggtgccgcaagaggtgcatatcctgcccaaccag
agcgtcctggaaaacatctgcctcggccttgcagcctctccccgcgcgctaaggccgcgt
gtcgagcaactcgtcgccgagctctccgtctcgctcgacctcgacgtgcaggccgccgcc
cttgaagtcgccgagcggcagattgtcgaaatcctgcgcggcctcgtgcgtgacgcgcgc
gtgatgatactcgacgaaccgacttcggcgctaacccccttcgagaccagcgccctcttt
cagcgcgtgcgcaaactccagagccagggtgtcggcatcttcttcatctcgcacaagctg
cgcgagattcgcgagatctgcggcacaatcagcgtactgcgcgacggtgtgatcgtgctt
agcgggccgctcgacagctacagcgacgccgagattatcgacgcgatgagccgggtgcag
atcgcggatgatgccgacaagaatcgtgtgggccgcaaggtttcgcagatcggcaagccg
cgtctcagcgtgcacgacctcagcggcgaagggttccgcgatatcagcctcgacgtgcgg
gccggcgaaatcctcggccttgccggggtcgtgggcgccggacgcacggagttcgccgaa
acgctcttcggccttcggccgcagatggcgggcagcgtcgtctttgatggcgcggaactg
aaaaagcgctcaccgcgcatatgcatcgacctcggcctcgtctacctgcctgaagaccgc
cagcagcacggccttttccttgaggcaccgctctcctggaacgtttcgtcctacctggtg
caccgcctgcccttctttctgcggcccggcgccgagcgtaaggtcttcgatgggttccgc
gcgagcatgggcatcaagtgcaccggcgccgaccaggaggcgcgcggtctttcgggtggc
aaccagcagaaggtgctgctcgccaaatgcctttcagctcggcccaaggtgctcatcctc
gacgagcccacgcgcggcgtggacgtggcggcccgcaacgacatctacgacctcatccgc
cggcttgccgcggacggcgtcgccatcatcctcatttcatccgacttcgacgagatcgaa
cagcttgccgaccgggtcgagatcatggccttcggccagtctggcggcaaactcacggac
cagatctcagttgacgccatcgcccgcctcgccttcggcgcctcggagggccgccatgct
tga
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