Sinorhizobium meliloti Rm41: BN406_06110
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Entry
BN406_06110 CDS
T02332
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00300
Lysine biosynthesis
smi00470
D-Amino acid metabolism
smi01100
Metabolic pathways
smi01110
Biosynthesis of secondary metabolites
smi01120
Microbial metabolism in diverse environments
smi01230
Biosynthesis of amino acids
Module
smi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN406_06110
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN406_06110
Enzymes [BR:
smi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN406_06110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
UfSP_MPN_N
Motif
Other DBs
NCBI-ProteinID:
CCM72392
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All DBs
Position
pSYMB:complement(1136774..1138000)
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AA seq
408 aa
AA seq
DB search
MNSHPTIALYDVVGNWLSVGGIPINRLAECVGGTPFFAYDRQLITSRVKFLRSVLPSDIH
LSYAVKANPMPAVVQHLARLVDAFDVASTTEMKTALDTPTPASHISFAGPGKTMVELTQA
VAAGVTIEIESPTEAARVVEVGSRLGIRPRVALRINPDFQIKGSGMRMGGGPQQFGIDVE
EIPSLLQKLAAAELDFLGFHVFSGSQNLHADILCEALAKHVSLLIRLAGECPWPVRYLNL
GGGFGIPYFEKDRPLDLFAIGETLSDLMECAVRPNLPDARVVIELGRYLVGESGVYVTRV
VDRKVSRGKVYLVVDGGLHHQLAASGNFGQVIRRNYPIAVANRMKETEFENVSVVGCLCT
PLDMLGDNITLPRADIGDLLVVFQAGAYGLTASPTAFLGHPLPVEILA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcgcatccgaccatcgcactgtacgacgttgtggggaactggctctccgtaggt
ggcattcccatcaaccggcttgcggagtgtgtcggtggcacaccgttcttcgcctatgat
cgccaactgattacatcgcgtgtcaagttccttcgctctgtcctgccctcggacattcat
ttgagctatgcggtgaaagccaatcccatgcctgcggtcgttcagcatttggctcggctg
gtcgatgccttcgacgttgcatcgacgactgaaatgaagacggcgcttgatacgccgaca
ccggcatcgcacatcagcttcgcggggccagggaaaactatggtcgaactcacccaggcg
gtcgccgccggcgtgactatcgaaatcgaatccccaaccgaagccgcacgcgtcgtcgag
gtcggcagccggcttggaattcggccgcgcgttgctttacggatcaaccctgatttccaa
atcaaaggatccggaatgcgcatgggtggcgggccgcagcagttcggaatcgacgtcgag
gagataccgtcgctgctccaaaagcttgcagccgcagagctggactttctcggttttcat
gttttctccgggtcgcagaaccttcatgcagacatcctttgtgaggccttggcaaagcat
gtctcactcctgattaggcttgccggagaatgcccgtggccggtccgctacctcaatctt
ggcggtgggttcgggattccgtatttcgaaaaggaccgtccactggacctttttgccatc
ggggagactctgagtgacctgatggagtgcgcagtccgcccgaatcttcccgacgctcgc
gtcgtcatcgaactcgggcgatatcttgtcggtgagtctggggtctatgtcacgcgcgtt
gtcgaccgcaaggtgtcacgtggaaaagtgtatttggtcgtcgatggcggtcttcatcat
caattggccgcgtccggcaatttcggccaagtcattcgccgaaactatccgatcgctgtc
gcgaacagaatgaaggagaccgagttcgagaacgtctcggtcgttggttgcctttgcaca
ccgctcgacatgctgggcgacaatatcacacttccgcgcgcagatatcggtgaccttttg
gtcgtgtttcaagcaggtgcttacggtctgaccgccagcccgacagcatttctcgggcat
ccacttccggtggagattctcgcctag
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