KEGG   Sinorhizobium meliloti Rm41: BN406_06654
Entry
BN406_06654       CDS       T02332                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
smi  Sinorhizobium meliloti Rm41
Pathway
smi00010  Glycolysis / Gluconeogenesis
smi00020  Citrate cycle (TCA cycle)
smi00260  Glycine, serine and threonine metabolism
smi00280  Valine, leucine and isoleucine degradation
smi00310  Lysine degradation
smi00380  Tryptophan metabolism
smi00620  Pyruvate metabolism
smi00630  Glyoxylate and dicarboxylate metabolism
smi00640  Propanoate metabolism
smi00670  One carbon pool by folate
smi00785  Lipoic acid metabolism
smi01100  Metabolic pathways
smi01110  Biosynthesis of secondary metabolites
smi01120  Microbial metabolism in diverse environments
smi01200  Carbon metabolism
smi01210  2-Oxocarboxylic acid metabolism
smi01240  Biosynthesis of cofactors
Module
smi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
smi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
smi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
smi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:smi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BN406_06654 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BN406_06654 (lpdA)
   00620 Pyruvate metabolism
    BN406_06654 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BN406_06654 (lpdA)
   00640 Propanoate metabolism
    BN406_06654 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BN406_06654 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BN406_06654 (lpdA)
   00310 Lysine degradation
    BN406_06654 (lpdA)
   00380 Tryptophan metabolism
    BN406_06654 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BN406_06654 (lpdA)
   00670 One carbon pool by folate
    BN406_06654 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smi04147]
    BN406_06654 (lpdA)
Enzymes [BR:smi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BN406_06654 (lpdA)
Exosome [BR:smi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BN406_06654 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_3 DAO GIDA Amino_oxidase AlaDh_PNT_C Thi4 2-Hacid_dh_C Lys_Orn_oxgnase 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: CCM69591
LinkDB
Position
pRM41A:46655..48100
AA seq 481 aa
MSTSYDVIVIGSGPGGYIAAIRAAQLGLKVAVVEREHLAGICSNWGCIPTKALLCSAEIY
HYAKHSGDYGLKIEGNVTPDLKAIVSRSRAIAQRMNGGVGFLMKKNKVDIIWGEAKLTKP
NEIVVSETSRTIVQPQGPIPRNTLGEGTYTAKHIIVATGARPRALPGIEPDGELIWTYFE
AMNPDAMPKSLLVMGSGAIGIEFASFYRTLGVDVTVVELLPQVMPVEDAEISALAKKQFE
KQGMKIHLEAKVTKVEKGANSITAHVEMKDGKVENITADRMISAVGVQANVENIGLEALG
VKTDRGFIAIDGYGKTNVPGIYAIGDVAGPPMLAHKAEHEAVICIEKIAGLPNVHPMDKS
KIPGCTYCHPQVASVGLTEAKAKEQGRDIRVGRFPFVANGKAIALGQDQGLVKTIFDKKT
GELLGAHLVGAEVTELIQGFVIAMNLDTTEEELMHTIFPHPTISETMKESVLDAHGRALN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtccacttcctacgacgtcatcgttattggttccggtcccggcggctatattgctgcg
atccgtgcggcacagctcggcctcaaggtcgctgtggtcgagcgcgagcatctggccggc
atctgctccaactggggctgcatcccgaccaaggcgctgctgtgctcggccgagatttac
cactatgccaaacattccggcgattacggcctcaagatcgaaggcaatgtgacccccgac
ctcaaggccatcgtctcccgctcgcgcgccattgcccagcgcatgaacggtggcgtcggg
ttcctgatgaagaagaacaaggtcgacatcatctggggcgaggccaagctgaccaaaccg
aacgagatcgtcgtctccgagacatccaggacgatcgttcagccgcagggaccgatcccg
aggaacacgctgggcgagggcacctacaccgccaagcacatcatcgtcgcgaccggcgca
cgtccgcgggcgctgcccggcatcgagccggatggtgagctgatctggacctatttcgag
gcgatgaaccccgatgcgatgccgaagtcgctactggtcatgggctccggcgccatcggc
atcgagttcgcatccttctaccgcaccctcggtgtggacgtgacggttgtcgaattgctg
ccgcaggtcatgccggtcgaggacgcggaaatctccgcgctcgccaagaagcagttcgag
aagcagggcatgaagatccatctggaggccaaggtcaccaaggtggagaagggcgccaac
tcgatcaccgcccatgtcgagatgaaggacggcaaggtcgagaatattacggccgaccgc
atgatctccgctgtcggcgtgcaggccaatgtcgagaatatcggccttgaggcgctcggc
gtgaagaccgaccgcggcttcatcgcgatcgacggctacggcaagaccaatgtgccgggc
atctacgccatcggcgacgtcgccggcccgccgatgctggcccacaaggccgagcacgag
gccgtcatatgcatcgagaagatcgccggcctgccgaacgttcacccgatggacaagtcc
aagatccccggctgcacctattgccacccgcaggtcgcctccgtcgggctgacggaagcc
aaggcgaaggaacagggtcgcgacatccgcgtcggccgcttcccgttcgtggccaacggc
aaggccatcgcgctcggccaagaccagggcctcgtcaagacgatcttcgacaagaagacc
ggcgaactgctcggcgcccatctcgtcggtgcggaagtgaccgaactcatccaaggtttc
gtcatcgccatgaacctcgatacgaccgaggaagagctgatgcacacgatcttcccgcat
ccgacaatctcggaaacgatgaaggaaagcgtgctcgatgcccatgggcgcgcgctgaac
gcgtga

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